Gene GSU2537 details

Gene Information

• Locus tag: GSU2537
• Symbol: speA
• ID: 2687789
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter sulfurreducens PCA
• Kingdom: Bacteria
• Replicon accession: NC_002939
• Strand: -
• Start bp: 2799433
• End bp: 2801340
• Gene Length: 1908 bp
• Protein Length: 635 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 637127227
• Product: arginine decarboxylase
• Protein accession: NP_953583
• Protein GI: 39997632
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG1166] Arginine decarboxylase (spermidine biosynthesis)
• TIGRFAM ID: [TIGR01273] arginine decarboxylase, biosynthetic

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAACGCT GGTCGATTAA CGAATCTGCG AAGATCTACA ACCTGCCCAA CTGGGGCGCC 
GACCTCTTCT CCATCAACAA GAAGGGGAAC GTCTGCGTGC ACCCGTCACC CACGTCCAAG 
CATTCCATCG ACCTGCGTGC CCTGGTGGAC GATCTGATCA AGCGCAAGAT CAAGCCCCCC 
ATCCTGCTCC GGTTCATGGA CGTGCTCCAG GGGCGGATCG CATCCATCAA CCGAGTCTTC 
AAGAACGCCA TCGACGAGAA CGACTACCCG GCCACCTACC AGACCTTCTA CCCCATCAAG 
GTGAACCAGC AGCGCCAGGT GGTGGAGGCC ATCGCCAAGT TCGGCAAGCG CTACAATATC 
GGCCTGGAAG TGGGCTCCAA GCCGGAGCTG GTGATCGGCA TCTCCTTCGC CACCGGCAAC 
GGCATCCCCA TCATCTGCAA CGGTTACAAG GACACCGAGT ATATCGAGAC GGTCCTCTAC 
GCCACCAAGA TCGGCTACGA CATCACCATC GTGGTGGAGA AGATGTTCGA GCTGGAGAAG 
ATCATTGCCC TGTCGAAAAA GACCGGCATC AAGCCCAAGC TGGGCATCCG GGTGAAGCTT 
TCCTCCAAGG GGACCGGCAA GTGGGCCACT TCCGGCGGTG AGGACGCCAA GTTCGGCCTC 
CGGATGTCGG AGATCATCGC CGCTATCGGG CTCCTGGAGC AAAATGACCT CCTGGACCGG 
GTGAAGCTCC TCCACTTCCA CATCGGCAGC CAGATCACCA AGATCGACAA GATCAAGAGC 
GCCCTGATCG AGGGAACCCG TATCTACGCC GAGATGCGCA AGCTGGGGGT CGGCATCCGG 
TACGTGGACA TCGGCGGCGG CCTGGGGGTC GACTACGACG GGTCCAAGTC GAGCTACTTC 
TCCAGCGTCA ACTACTCCAT CGAGGAGTAC GCCAACGACG TCATCTACCA GATCAAGAAC 
ATCTGTGAGG ACGCCGGCGT CGAATGCCCC AACATCATCT CCGAATCGGG GCGGGCCACG 
GCGGCCCACT ACTCGGTGCT CGTGACCAAT CTCCTCAACA CCAACACGTC CAATGCCATG 
CCCGACTTCG AGGAGACCCT CAACGGCACG GAAAAGCTGG CCCCAACGGT CAAGAAGCTG 
GTGGACATCT ACAAGAGCAT CGACCGCTAT TCTCTGCGGG AGGACTACCA CGATACGGTC 
CAGCTCATCC AAGAGGCGGT GAGCCTCTTC AACCTGGGCT ACCTGACCCT TAACGAGCGG 
GCCATGGCCG AGTGGCTCCA CGGTAAGATC CTGCGCAAGA TCAACGGCAT CGTGGAAAAG 
ATCAAGCCGA TCCCCGAGGA GCTCCAGAAT TTCCAGCTGA GCCTGCGGCA GACCTATTTC 
GCCAATTTCT CGCTGTTCCA GTCGATTCCC GACTCTTGGG CCATCGACCA GCTCTTTCCC 
ATCGTGCCGA TCCAGCGGCT CAACCAGAAG CCCGACGTGA TGGCCTCCAT CGCCGACATC 
ACCTGCGATT CGGACGGGGA GATCACCAGC TTCGTGGGCG AGAACGGCCG GACCAAGTAC 
CTGCCGCTTC ACAAGATGCG CAAGGACGAG GACTATTTCG TGGGCTTCTT CCTGATCGGC 
GCCTACCAGG AGATCCTGGG GGACATGCAC AACCTGTTCG GCGATACCAA CGCCGTCCAC 
GTCACCTTCA ACAAGAAGAC CGGCTACAAG ATCGATACGG TCATCCATGG CGACGCCACC 
TGGGAGAGCC TCAAGTACGT CCAGTACAAG GGGCCGGAGA TCCTGAAGCA CGTCCGCGAC 
ACCCTGGAGA AGGACGTGGC CCTTCGCAAG GTCACCATCG AGGAGAGTAG CCATTTCCTT 
GAGCTGCTGG ACCGGACGCT CCTGGGCTAC ACCTACCTGG GGGAATGA 

 

Protein sequence

MERWSINESA KIYNLPNWGA DLFSINKKGN VCVHPSPTSK HSIDLRALVD DLIKRKIKPP 
ILLRFMDVLQ GRIASINRVF KNAIDENDYP ATYQTFYPIK VNQQRQVVEA IAKFGKRYNI 
GLEVGSKPEL VIGISFATGN GIPIICNGYK DTEYIETVLY ATKIGYDITI VVEKMFELEK 
IIALSKKTGI KPKLGIRVKL SSKGTGKWAT SGGEDAKFGL RMSEIIAAIG LLEQNDLLDR 
VKLLHFHIGS QITKIDKIKS ALIEGTRIYA EMRKLGVGIR YVDIGGGLGV DYDGSKSSYF 
SSVNYSIEEY ANDVIYQIKN ICEDAGVECP NIISESGRAT AAHYSVLVTN LLNTNTSNAM 
PDFEETLNGT EKLAPTVKKL VDIYKSIDRY SLREDYHDTV QLIQEAVSLF NLGYLTLNER 
AMAEWLHGKI LRKINGIVEK IKPIPEELQN FQLSLRQTYF ANFSLFQSIP DSWAIDQLFP 
IVPIQRLNQK PDVMASIADI TCDSDGEITS FVGENGRTKY LPLHKMRKDE DYFVGFFLIG 
AYQEILGDMH NLFGDTNAVH VTFNKKTGYK IDTVIHGDAT WESLKYVQYK GPEILKHVRD 
TLEKDVALRK VTIEESSHFL ELLDRTLLGY TYLGE