| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU2511 |
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| Symbol | |
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| ID | 2685689 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sulfurreducens PCA |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002939 |
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| Strand | - |
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| Start bp | 2769311 |
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| End bp | 2771932 |
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| Gene Length | 2622 bp |
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| Protein Length | 873 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637127201 |
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| Product | sensory box/GGDEF family protein |
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| Protein accession | NP_953557 |
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| Protein GI | 39997606 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.064044 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTGCGT TCTTCACACA GTACAGCCGC CCCGCGAAAA TCCTGCTGGG TATCACCGGT
CTGCTCCTGG CGATTCTCCT CGTTCTCTTT TTCGGCGTAC GCCACATTCT GGTCGACAGT
TTCACCGAGG TGGAGTCCCG GGACATGTGC AAGAACGTGG AGCGGGCCAC CAGCATCATC
GCCGACGAGC TGGACAAGCT CTCGACGATC TGCACCGACT ATTCGGGATG GGACGACGCC
TACCAGTTTG TCCGGGACCG CAACAGCGAC TTCATCGCCT CGAATCTCAC CATTGAAATA
TATCCCAAGC TCCGGCTGAA TGCCCTGGTG TATCTCAATT CCAGGGCGGA TGTGGTCTAC
GGCCGGGGGT TCGACAGAGC CTCCGGAAAG TACGAACCGC TTCCCGCCGG CCTGGAGGAG
CACCTGAAGC CCGGGGCGAA GCTCGTGTCC CTCACCACCC CGGACCAGCA CGTCTCGGGC
ATCGTGACCC TGCCCGAGGG CCCGTTCCTG GTTGCGGCCC GACCCGTGCT CACGAGCAAG
TATGCCGGTC CGGTGCGGGG TGTCCTCGTG CTCGGCCGCC TGCTCGACAA AGAAGAGGTG
ATGCGGCTCT CGGAGACAAT CCACATTCCC CTGGAGATAC ACACCGCAGA CGATGCTACG
CTTCCCCCCG ATTTCGCGGC GGTCCGGGGC GAACTGGCAC AGGGGGCGCC GGTCGTTCTG
CGCCGCGCCG ACAGCAAAAT GATCGCCGGC TATGCCGCCA TTCCCGACAT CTATGGCAAA
CCCGCCCTGC TTCTGAGGGT CGACGCGCCC CGCAGCATCT ACCAGGAGGG GAAAAAGGCC
GTCACCTACT TCCTGACCTG GTTCGCGGTG GTGGGGGTCT GCTTCGCGTT TATCATCAAC
CTGTTCTGGC GCAGGCTGCT GGAGTCGCTG CAGCAGGGCC GGCGCTCCGA GGAGCGGAAC
CGGCTGGTGG TGGAGCGGAC CAACCAGGCG ATCCTGTTGC TGGAGCCGGG GGCGGGGACG
ATCATCGACG CCAATCCGGC CACCTGCGTC CTGCTCGGCT TCTCGCGAAA CGAACTGACC
GGGGCTGACA TCCACGCGCT CCTGAGCGGT CCCGTCCAGG AAGTAGATAG CGAACTGGAG
CGTTGCCTCC GGGAAACGCG GGAGCTGAGC CTGTGTCACC GGGACGGCGC CGAGCTCGTT
GTCGAGGCCA TGGCCACCCA GGTCCCCCAC GGGGACGATC AGGCCCTTTG CCTCATGTTC
CACGACATCA CCGATCGCCG CCGGTTCCAG GAGGAGCTCC TGCACCAGGC AACCCACGAC
ACCCTCACCG GGCTCCCCAA CCGCTCGCTT CTGGAGGACC GCCTCAATCA GGCCGTCGCT
GGCGCCCGCC GCCGGGGGCA GATGGTGGCG CTCCTCATGT TCGACCTGGA CAACTTCAAG
GTGGTCAACG ACACCCTGGG TCACACGGCA GGGGACCAGC TCCTGCGCAG CGTGGCGGCC
CGCATCCGAT CCTTCGTGCG CAACTGCGAC ACCTTTGCCC GGCTGGGAGG GGATGAATTC
GTCATCGTCC TGACCAACCT GACGCGGATG GATGATGCGG TCACCGTGGC CGAGAGCTTC
CGCAACCTCC TCGCCATGCC GTTTTTCCTG GGCGGGCGGG AGATATTCAT TACCGCCAGC
ATGGGCATCT CCCTGTTCCC CGACGACGGC GACACCATGG AAGCACTCAT CAAGAAGGCC
GATACGGCCA TGTACCACAT CAAGGAAAGC GGCCGGAACA GCTTCCAGTT CTTTGCCGAG
GAGATGAACC AGAAGGTCAA TGCCCGCCTC ACCATTGAAA CTGGGCTGCG CCGGGCCCTG
GAGAAGGGGG AGATGCTCCT GCACTACCAG CCCCGCCTGG AACCGGGCAC CGGCGCCGTG
GTCGGCATGG AGGCGCTGGT CCGCTGGAAC AGCCCGGACA TGGGGTTGAT CTCGCCCGCC
GACTTCATCC CCATCGCCGA GGATTCGGGG CTCATCGTGG AAATCGGGGA CTGGGTCCTG
GCTACCGCCT GCTGCCAGGC GCTGGAATGG CACCGGATGG GCCACGATTC CCTCCGGGTG
TCGGTCAACA TCTCCGCCCG CCAGTTCGTG GGCCACGACT TCGTGGACCG GGTGGTGCGG
ATCATCGAGC AGAGCGGGCT CTCCCCCCAC TTTGTGGAGC TGGAACTGAC CGAGACCGCC
CTGACCCACA ACGTGGACGA AACGGTCAAG ATCATGAACC GGCTCCGGGA GCGGGGTATC
ACCATCAGCA TCGACGACTT CGGTACCGGC TACTCGTCGC TCAACTACCT GAAGCGTTTC
CCGGTGGATG TCCTCAAGAT CGACAAGTCG TTCATCGACG ATATGGTGAA GCGGCGGGAA
GATGCGGCAA TCGTCGCCAC CATCATCGGC ATAGCCCACC ACATGCACAT GAAGGTGGTT
GCCGAGGGGG TCGAGACCGC CGAGCAGATG AAGCTGCTGA TGGAGGGGAA CTGCGAGGAA
ATCCAGGGCT TTTACTTTTC CCGCCCGCTG CCGCCGGAGG AGTTCGAGAG GTATATCGCC
GGCCGCACGG TGCCCCTGTT GCCGGCCGCG CCGAGGGAAT GA
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| Protein sequence | MVAFFTQYSR PAKILLGITG LLLAILLVLF FGVRHILVDS FTEVESRDMC KNVERATSII
ADELDKLSTI CTDYSGWDDA YQFVRDRNSD FIASNLTIEI YPKLRLNALV YLNSRADVVY
GRGFDRASGK YEPLPAGLEE HLKPGAKLVS LTTPDQHVSG IVTLPEGPFL VAARPVLTSK
YAGPVRGVLV LGRLLDKEEV MRLSETIHIP LEIHTADDAT LPPDFAAVRG ELAQGAPVVL
RRADSKMIAG YAAIPDIYGK PALLLRVDAP RSIYQEGKKA VTYFLTWFAV VGVCFAFIIN
LFWRRLLESL QQGRRSEERN RLVVERTNQA ILLLEPGAGT IIDANPATCV LLGFSRNELT
GADIHALLSG PVQEVDSELE RCLRETRELS LCHRDGAELV VEAMATQVPH GDDQALCLMF
HDITDRRRFQ EELLHQATHD TLTGLPNRSL LEDRLNQAVA GARRRGQMVA LLMFDLDNFK
VVNDTLGHTA GDQLLRSVAA RIRSFVRNCD TFARLGGDEF VIVLTNLTRM DDAVTVAESF
RNLLAMPFFL GGREIFITAS MGISLFPDDG DTMEALIKKA DTAMYHIKES GRNSFQFFAE
EMNQKVNARL TIETGLRRAL EKGEMLLHYQ PRLEPGTGAV VGMEALVRWN SPDMGLISPA
DFIPIAEDSG LIVEIGDWVL ATACCQALEW HRMGHDSLRV SVNISARQFV GHDFVDRVVR
IIEQSGLSPH FVELELTETA LTHNVDETVK IMNRLRERGI TISIDDFGTG YSSLNYLKRF
PVDVLKIDKS FIDDMVKRRE DAAIVATIIG IAHHMHMKVV AEGVETAEQM KLLMEGNCEE
IQGFYFSRPL PPEEFERYIA GRTVPLLPAA PRE
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