Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU2489 |
Symbol | |
ID | 2686491 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | + |
Start bp | 2733951 |
End bp | 2735339 |
Gene Length | 1389 bp |
Protein Length | 462 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637127179 |
Product | TatD family deoxyribonuclease |
Protein accession | NP_953535 |
Protein GI | 39997584 |
COG category | [L] Replication, recombination and repair [R] General function prediction only |
COG ID | [COG0084] Mg-dependent DNase [COG0535] Predicted Fe-S oxidoreductases |
TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGAGT CAGGTTTTCT CATCGACACC CACGCCCATA TCGACGGCCA CGACTTTGCG GCCGATTTCG ACGCCATGCT CTCCCGCGCC TGGGAGGCGG GGCTTTCCCA CATCGTCACG GTAGGGGCTG ACCTGGAGTC CAGCCGGGCC GCAGTGGCAC TGGCCGGCCG CCACGAGCGG ATCTGGTGCG CCGTGGGCAT CCATCCCCAC GACGCGGGGC GGGTGACCGA CCGCTGCTAC GACGAGATCA GGACCCTGGC CCAGGGGAAC CCCAAGGTGG CGGCCATCGG CGAAATCGGG CTCGACTTCT TCCGGGACCG CTCGCCCCGC GACGAGCAGG AACAGGTCTT CCGCCGCTTC ATCAGGCTGG CCCGGGAACT GGCATTGCCC ATCGTGGTGC ACGACCGCGA CGCCCACGAG CGGGTCATGG CGATCCTGCG CGAGGAAAAG GCCCGGGACG TGGGTGGCGT GCTCCACTGC TTCTCCGGCG ACCTGGCCAT GGCCAGGGAA TGCGTGGACA TGGGCTTCCT GATCTCCATC CCCGGCACCG TCACCTACCC TTCCAACGAA GCCCTGCGCG AGGTGGTGCG CGGCGTCAAG ATCGAGCACC TGCTGGTGGA GACCGACTGT CCCTACCTCA CCCCGGTCCC CCACCGCGGG AAGCGGAACG AGCCGGCCTA CGTGCGGCTC ACCGCCGAAA AAGTGGCGGA ACTGAAAGGG CTCTCCCTGG AGGACGTGGG ACGGATCACC TCCCTCAACG CCCGGCGGCT CTTCGGCATC GGGGAGAGCG ACCAGGCGGC CCGGATCGCC TACCGGATCA GGAACTCCCT CTACCTGAAC ATCACCAACC GCTGCTCAAA CCGCTGTTCC TTCTGCGCCA AGTTCGACGA CTACACGGTG AAAGGACACC ACCTCCGGCT GGACCACGAG CCGGACAGCG CCGAGGTGCT GGCTGCCGTC GGTGAGCCGG GGCCGGTGGA TGAAATCGTC TTCTGCGGCT TCGGCGAGCC CATGCTCCGC CTCGACCTGA TCGTGGAAGT GGCGCGGGAA CTGAAGAAAC GCGGCTTCCG CATCCGTATC AACACCGACG GCCAGGCGAA CCTGGTCCAC GGCCGCAACG TCCTGCCCGA ACTGCAAGGC CTGGTGGACT GCATCTCCGT GAGCCTCAAC GCCGCCGACG CCGACACGTA CGCCCGCCTC TGCAACACCC CCTTCGGCAC CAACGGCTTC AACGGCATCT GCCGGTTCCT GGAAGAGGCC CGGCTGTACA TCCCCACGGT GGTGGCCACG GCCGTTACCG TGCCGGGCAT CGACGTGGCC GCCGTGCGCG CCCTGGCCGA GTCCCTCGGC GTCGAGTTCC GGGAGCGCGA ATTTGCCGAG GTGGGGTAA
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Protein sequence | MNESGFLIDT HAHIDGHDFA ADFDAMLSRA WEAGLSHIVT VGADLESSRA AVALAGRHER IWCAVGIHPH DAGRVTDRCY DEIRTLAQGN PKVAAIGEIG LDFFRDRSPR DEQEQVFRRF IRLARELALP IVVHDRDAHE RVMAILREEK ARDVGGVLHC FSGDLAMARE CVDMGFLISI PGTVTYPSNE ALREVVRGVK IEHLLVETDC PYLTPVPHRG KRNEPAYVRL TAEKVAELKG LSLEDVGRIT SLNARRLFGI GESDQAARIA YRIRNSLYLN ITNRCSNRCS FCAKFDDYTV KGHHLRLDHE PDSAEVLAAV GEPGPVDEIV FCGFGEPMLR LDLIVEVARE LKKRGFRIRI NTDGQANLVH GRNVLPELQG LVDCISVSLN AADADTYARL CNTPFGTNGF NGICRFLEEA RLYIPTVVAT AVTVPGIDVA AVRALAESLG VEFREREFAE VG
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