Gene GSU2489 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGSU2489 
Symbol 
ID2686491 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sulfurreducens PCA 
KingdomBacteria 
Replicon accessionNC_002939 
Strand
Start bp2733951 
End bp2735339 
Gene Length1389 bp 
Protein Length462 aa 
Translation table11 
GC content67% 
IMG OID637127179 
ProductTatD family deoxyribonuclease 
Protein accessionNP_953535 
Protein GI39997584 
COG category[L] Replication, recombination and repair
[R] General function prediction only 
COG ID[COG0084] Mg-dependent DNase
[COG0535] Predicted Fe-S oxidoreductases 
TIGRFAM ID[TIGR00010] hydrolase, TatD family 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGAGT CAGGTTTTCT CATCGACACC CACGCCCATA TCGACGGCCA CGACTTTGCG 
GCCGATTTCG ACGCCATGCT CTCCCGCGCC TGGGAGGCGG GGCTTTCCCA CATCGTCACG
GTAGGGGCTG ACCTGGAGTC CAGCCGGGCC GCAGTGGCAC TGGCCGGCCG CCACGAGCGG
ATCTGGTGCG CCGTGGGCAT CCATCCCCAC GACGCGGGGC GGGTGACCGA CCGCTGCTAC
GACGAGATCA GGACCCTGGC CCAGGGGAAC CCCAAGGTGG CGGCCATCGG CGAAATCGGG
CTCGACTTCT TCCGGGACCG CTCGCCCCGC GACGAGCAGG AACAGGTCTT CCGCCGCTTC
ATCAGGCTGG CCCGGGAACT GGCATTGCCC ATCGTGGTGC ACGACCGCGA CGCCCACGAG
CGGGTCATGG CGATCCTGCG CGAGGAAAAG GCCCGGGACG TGGGTGGCGT GCTCCACTGC
TTCTCCGGCG ACCTGGCCAT GGCCAGGGAA TGCGTGGACA TGGGCTTCCT GATCTCCATC
CCCGGCACCG TCACCTACCC TTCCAACGAA GCCCTGCGCG AGGTGGTGCG CGGCGTCAAG
ATCGAGCACC TGCTGGTGGA GACCGACTGT CCCTACCTCA CCCCGGTCCC CCACCGCGGG
AAGCGGAACG AGCCGGCCTA CGTGCGGCTC ACCGCCGAAA AAGTGGCGGA ACTGAAAGGG
CTCTCCCTGG AGGACGTGGG ACGGATCACC TCCCTCAACG CCCGGCGGCT CTTCGGCATC
GGGGAGAGCG ACCAGGCGGC CCGGATCGCC TACCGGATCA GGAACTCCCT CTACCTGAAC
ATCACCAACC GCTGCTCAAA CCGCTGTTCC TTCTGCGCCA AGTTCGACGA CTACACGGTG
AAAGGACACC ACCTCCGGCT GGACCACGAG CCGGACAGCG CCGAGGTGCT GGCTGCCGTC
GGTGAGCCGG GGCCGGTGGA TGAAATCGTC TTCTGCGGCT TCGGCGAGCC CATGCTCCGC
CTCGACCTGA TCGTGGAAGT GGCGCGGGAA CTGAAGAAAC GCGGCTTCCG CATCCGTATC
AACACCGACG GCCAGGCGAA CCTGGTCCAC GGCCGCAACG TCCTGCCCGA ACTGCAAGGC
CTGGTGGACT GCATCTCCGT GAGCCTCAAC GCCGCCGACG CCGACACGTA CGCCCGCCTC
TGCAACACCC CCTTCGGCAC CAACGGCTTC AACGGCATCT GCCGGTTCCT GGAAGAGGCC
CGGCTGTACA TCCCCACGGT GGTGGCCACG GCCGTTACCG TGCCGGGCAT CGACGTGGCC
GCCGTGCGCG CCCTGGCCGA GTCCCTCGGC GTCGAGTTCC GGGAGCGCGA ATTTGCCGAG
GTGGGGTAA
 
Protein sequence
MNESGFLIDT HAHIDGHDFA ADFDAMLSRA WEAGLSHIVT VGADLESSRA AVALAGRHER 
IWCAVGIHPH DAGRVTDRCY DEIRTLAQGN PKVAAIGEIG LDFFRDRSPR DEQEQVFRRF
IRLARELALP IVVHDRDAHE RVMAILREEK ARDVGGVLHC FSGDLAMARE CVDMGFLISI
PGTVTYPSNE ALREVVRGVK IEHLLVETDC PYLTPVPHRG KRNEPAYVRL TAEKVAELKG
LSLEDVGRIT SLNARRLFGI GESDQAARIA YRIRNSLYLN ITNRCSNRCS FCAKFDDYTV
KGHHLRLDHE PDSAEVLAAV GEPGPVDEIV FCGFGEPMLR LDLIVEVARE LKKRGFRIRI
NTDGQANLVH GRNVLPELQG LVDCISVSLN AADADTYARL CNTPFGTNGF NGICRFLEEA
RLYIPTVVAT AVTVPGIDVA AVRALAESLG VEFREREFAE VG