Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU2480 |
Symbol | kdpA |
ID | 2687852 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | + |
Start bp | 2720267 |
End bp | 2722045 |
Gene Length | 1779 bp |
Protein Length | 592 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637127170 |
Product | potassium-transporting ATPase subunit A |
Protein accession | NP_953526 |
Protein GI | 39997575 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2060] K+-transporting ATPase, A chain |
TIGRFAM ID | [TIGR00680] K+-transporting ATPase, KdpA |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAACGTGT ACGAATCGCT GCAAACAGTT CTCTTGTTTG TCGTTCTCCT GGCCATGGTC AAGCCCCTGG GCACCTTCAT GGCCCGGGTA TTCCAGGGGG AGCGGACGAT CCTCTCACCC GTCCTCGCGC CCGCCGAGAG CCTCCTCTAC GGGGTTTGCG GAGTGAACAG TGAAGAGGAG ATGGACTGGA AGCGCTATGC CCGGGCCATG GTCCTCTTCA ATCTGGTCAT TTTCGCGACA CTTTTCGCCA TGCTGATGCT GCAGCACCTG TTGCCGCTCA ATCCGCAGAA GTTTCCGGCC TTCAGCTGGC AACTGGCCCT CAACACCGCC GTCAGTTTCA CCACGAATAC CAACTGGCAG GCCTATGCGG GTGAACAGGC GGCCAGCTAC TTCACCCAGA TGGTTGGGCT GACGGTGCAC AACTTCGTCT CCGCCGCCAC CGGCATTGCC GTGGCCATCG CAGTTATTCG CGGCTTCGCG CGGCGCACGA CCTCCGCGCT GGGCAACTTC TGGGTCGACC TGACCCGCGC GACGCTCTAC ATCCTGGTAC CGATCTCCCT GATCGCCGCC CTCGTCCTCG TTTCCCAGGG GGTGATCCAG AACTTCAGCG CCTACCAGGC GGTGTCCCTG GTGCAGCCGG TCACCTACGA CACGCCGAAG CGTGACGGCA CGGGAAGCCC GGTCAAGGAC CCCACGGGAA ATCCGGTCAC CGAACGTGTG ACCGCCAAGG AGGTCACGAT CCCCATGGGG CCGGTCGCTT CCCAGGAAGC GATCAAGGAA CTGGGGACCA ACGGCGGCGG CTTCTTCAAC GCCAACTCGG CCCATCCGTT CGAGAACCCC ACTCCCCTTT CCAACATGCT GGAGATCCTG CTCATCCTCC TCATCCCGTT CTCCCTCACC TACACCTTCG GCGCCATGGT GGGGAATACC CGCCAGGGCT GGACCCTCCT CGGGGTCATG CTCCTGATCC TGCTGGCCTC CTTTGCGGTG CTTCAGGGTG TTGAATCGGG CGGCAATCCG CTGGTGACAA AGCTCGGCGT TCACGGGGCC AACATGGAAG GAAAGGATAC CCGCTTCGGC CTGGCCGGAA GCAGCCTTTT CACGGTCGCA ACCACCGGCA CATCCTGCGG CGCGGTGAAC ACTATGCACG ACTCCCTCAC TCCGATCGGC GGCATGATCC CCATGAGCCT GATGCTCCTG GGTGAACTGG TTCCCGGCGG GGTCGGCTCC GGCCTCTACA CCATGCTCGC CTTCGCCGTG ATCGCAGTAT TCGTCTCGGG CCTGATGATC GGGCGCACGC CGGAATACCT GGGGAAAAAA ATCGAGGTGC GGGAGATGTG GATGTCGGTC GTCACGGTTT TGGCTGCCGG CGTCATGGTG CTGATACTTT CGGGAATCGC CATGATCTCT CCGTCCGCCG TGGCCGCCAT GGCCAATCCA GGAGCCCACG GCCTCTCCGA GGTCCTCTAC GCCTTCGCCT CCATGGCCAA CAACAACGGG AGCGCCTTTG CGGGGCTCTC GGCCAACACG ACCTTCTACA ACATCCTCGG CGCCCTGGCA ATGATCGTCG GACGGTTCGC CCCGGCAGTG GCGGTGCTCG CCATGGCCGG CTCCCTGGCG GAGAAGAAAT ACGTACCGCC GAGCCTCGGG ACCCTGCCGA CGGACAAGGT GCCGTTCGCC CTCTGGCTGA CCCTGGTCAT CCTCATCGTC GGTGCGCTCA CCTTTTTCCC GGCGCTGTCG CTCGGGCCGA TCGTGGAGCA CCTGACCATG ACGATGTAG
|
Protein sequence | MNVYESLQTV LLFVVLLAMV KPLGTFMARV FQGERTILSP VLAPAESLLY GVCGVNSEEE MDWKRYARAM VLFNLVIFAT LFAMLMLQHL LPLNPQKFPA FSWQLALNTA VSFTTNTNWQ AYAGEQAASY FTQMVGLTVH NFVSAATGIA VAIAVIRGFA RRTTSALGNF WVDLTRATLY ILVPISLIAA LVLVSQGVIQ NFSAYQAVSL VQPVTYDTPK RDGTGSPVKD PTGNPVTERV TAKEVTIPMG PVASQEAIKE LGTNGGGFFN ANSAHPFENP TPLSNMLEIL LILLIPFSLT YTFGAMVGNT RQGWTLLGVM LLILLASFAV LQGVESGGNP LVTKLGVHGA NMEGKDTRFG LAGSSLFTVA TTGTSCGAVN TMHDSLTPIG GMIPMSLMLL GELVPGGVGS GLYTMLAFAV IAVFVSGLMI GRTPEYLGKK IEVREMWMSV VTVLAAGVMV LILSGIAMIS PSAVAAMANP GAHGLSEVLY AFASMANNNG SAFAGLSANT TFYNILGALA MIVGRFAPAV AVLAMAGSLA EKKYVPPSLG TLPTDKVPFA LWLTLVILIV GALTFFPALS LGPIVEHLTM TM
|
| |