Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU2317 |
Symbol | |
ID | 2687382 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | - |
Start bp | 2536490 |
End bp | 2538256 |
Gene Length | 1767 bp |
Protein Length | 588 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637127010 |
Product | TrkA domain-containing protein |
Protein accession | NP_953366 |
Protein GI | 39997415 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0471] Di- and tricarboxylate transporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.12678 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACCATTG AGATTCTGCT CGTGCTGGGC CTGGTCCTCT CTGCGGTAAT CCTCTTTGCC ACGGAGCGGA TTCCGGTTGA CATCGTCGCC CTCATTCTCA TGGCAACGCT CCTTCTTTCC GGTATCATTG CCCCGGAAGA AGCCATCGGA GGTTTCAGCA ACCCGGCCAC AGTCACCGTT GGGGCAATGT TCATACTTTC GGCGGGGCTT TTCAGGACCG GCGCGGTGAA CCTGCTGGGA ATCACCCTGG CCCGGCTGGG AGCGTTGAGT TTCTGGCTGG TCCTGGTAGT TATGATGCTG GCGGTGGGGG TACTCTCCGC CTTTATCAAC AACACGGCTG CAGTGGCCAT CTTTCTTCCC ATTGCCCTGG GAGTGGCTCG GGATACGGGG GTATCGGCCG GCAGGCTCCT CATGCCCCTC TCCTTTGCCT CCATGTTCGG CGGGGTTTGC ACCCTCATCG GTACCTCCAC CAATATTCTC GTATCCTCCA TTGCCGGCCG GCATGGCCTC GAACCTTTCG GCATGTTCGA GATGAGCGGT CTTGGTCTCA TTTTTTTCGC AGCGGGGAGT GTCTACATGC TGCTGGTGGG CGTGAGGCTC ATTCCCGAGC GCAAGGGGGA GGAGGACCTG CGAAGGCTCT TCGGCATCAG CGATTACCTG ACCGAGATCG TGCTGGAGCC GGAGGCCCGC TCCGTGGGAT CGGTGCTGGC CGATTCGCCG CTGCTGCAAG ATATTTCGAT CCGGAGCGTG GAGGTATTCA GGGACGGGAC CCTCCTCGAT GAGCCCGGCG ACCGGATCGT GCTCCAGGCC GGCGATCATC TGAAGGTCCG CTGCGATCTG GAGAATTTCA GGAAACTCAA GGAGCGGCGC GGCATCGCCC TGCGACAGGA TTCGGGCCGT GCGCCGGGAG AGGAGGCGGT CCTGGTGGAG GCGGTGGTGG CACCGGGGTC CACCCTGGAC GGCCGAAGTC TCAAACAGGC ACGGTTCCGT TCCCGGTACG GCCTTACGGC GCTTGCGGTC CGCCACAGGG GGCGGCTCAT GAGGGAAGAC CTGGAAATGA TGCAGCTGCG GGCGGGCGAC GTTCTTCTCT TCGAGGTGGA GCAGCACCAC CTGGACCATC TCCGGGAGGA CAAGACCTTT GTTCTGGTCT CCCAGGTTGA GCTCCCCGTC TTCCGCAAAA GCAGGATGGT CACTGCTGTT GCCATCGTGG CTGCAGTGGT GGCTGCCGCG GCAACGGGGC TGGTTCCCAT CGTGGCCGGA GCCATCGTTG GTTGCATCCT GATGGTTCTG ACCCGTTGTC TGACCCGCGA GGAGGCCTAC AGCGCCATCA ACTGGCAGGT GATCTTTCTC CTTGCCGGAG TTCTCACCCT GGGGACTGCC CTGGAAAAGA GCGGCGCAGC ACGTCTCCTG GCGGGCTACC TGGTTGAGAC GGTGGGGACA TGGGGGCCCG TGGCCCTGGT CTCGGCCTTC TACCTCGCGA CGTCGCTGCT GACCGAGATG ATGTCCAATA ATGCGACGGC AGCCATGCTG GCTCCCATCG CCATCGCTTC AGCCGAGGCA TACGGGGTTG ATTCCCGCCC CTTCCTCATG GCCATCACCT TTGCCGCTTC AGCCAGTTTC ATGACCCCGG TCGGCTACCA GACCAACACC CTGATCTATG GGCCAGGCCA GTTCAGGTAT GCTGATTTTC TGCGAGTGGG AACGCCACTC AATATTCTTT TTTGGGTTCT GGCGACGATA TTCATTCCGC GCTTCTGGCC TTTTTGA
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Protein sequence | MTIEILLVLG LVLSAVILFA TERIPVDIVA LILMATLLLS GIIAPEEAIG GFSNPATVTV GAMFILSAGL FRTGAVNLLG ITLARLGALS FWLVLVVMML AVGVLSAFIN NTAAVAIFLP IALGVARDTG VSAGRLLMPL SFASMFGGVC TLIGTSTNIL VSSIAGRHGL EPFGMFEMSG LGLIFFAAGS VYMLLVGVRL IPERKGEEDL RRLFGISDYL TEIVLEPEAR SVGSVLADSP LLQDISIRSV EVFRDGTLLD EPGDRIVLQA GDHLKVRCDL ENFRKLKERR GIALRQDSGR APGEEAVLVE AVVAPGSTLD GRSLKQARFR SRYGLTALAV RHRGRLMRED LEMMQLRAGD VLLFEVEQHH LDHLREDKTF VLVSQVELPV FRKSRMVTAV AIVAAVVAAA ATGLVPIVAG AIVGCILMVL TRCLTREEAY SAINWQVIFL LAGVLTLGTA LEKSGAARLL AGYLVETVGT WGPVALVSAF YLATSLLTEM MSNNATAAML APIAIASAEA YGVDSRPFLM AITFAASASF MTPVGYQTNT LIYGPGQFRY ADFLRVGTPL NILFWVLATI FIPRFWPF
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