| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU2313 |
|---|
| Symbol | |
|---|
| ID | 2687341 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sulfurreducens PCA |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002939 |
|---|
| Strand | - |
|---|
| Start bp | 2531046 |
|---|
| End bp | 2531951 |
|---|
| Gene Length | 906 bp |
|---|
| Protein Length | 301 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637127006 |
|---|
| Product | response regulator |
|---|
| Protein accession | NP_953362 |
|---|
| Protein GI | 39997411 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
|---|
| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.483613 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGAATTC TCATCGCCGA TGATGATGTA ACCTCGCGCA CTATGCTGAC CGGACTGATG
AAACGGTGGG GCTACGACGT GGTGGAGGCG ATTGATGGAG CGCAGGCCTG GGAAGAACTG
CAAAAAAGCG ATGCCCCCAA GCTGGCCGTA CTGGATTGGG TTATGCCCGT CATGGACGGG
GTGGAGGTGA TCCGGCAGGT CCGTGCCCGG TCAGCTGAAC ATCTGCCCTA CATTCTCCTG
CTCACGGCCA AAAACGGTAC TGACGACGTA ATCCGCGGGC TCGATGCCGG CGCCGACGAT
TACGTGGGCA AACCGTTCAG TCTCGGAGAA CTGCGCGCCC GGATCCAGGT GGGCCGCCGC
ACCGTCGAGC TGCATTCGAG ACTGCAGGAG ACCCAGGAGG CCCTGAATCA CCAGGCCACC
CACGATCCAT TGACCGGCGT CATGAACCGG CGCGCGATTA TTGACCACCT GGAAAAAGAG
CTGTCCCGGG TCAAGCGGGA TGGGGGAAGT TTGAGCATCG GCATCCTGGA TATCGATCAC
TTCAAGCGGG TAAACGACCG TTACGGTCAT CAGACCGGAG ACGAGGTGCT GTGCGGCTGC
GTCGGAGTGC TGGGGGGGCT GCTCAGGGAC TATGACCTGC TGGGTCGGCT GGGCGGAGAA
GAATTCCTCG TGGTAGCTCC GGGCACGGGA GATGATTGCA ATCATCTCTA TGAGCGGCTC
CGGGCGGCCA TAGCTTCGAC AAAATTCACC TCCAGGGCTA AGCCGGTGTC AGTTACCGTA
AGCATCGGTG TTGCCGCGTG CGACGGCACC GCCGGTCTGG ACGAACTGCT GGCTGCCGCC
GATGATGCCT TGTATCGGGC TAAAAGGTCA GGACGGGACC GCGTGGTTCA GGCGGGATCA
CCATGA
|
|---|
| Protein sequence | MRILIADDDV TSRTMLTGLM KRWGYDVVEA IDGAQAWEEL QKSDAPKLAV LDWVMPVMDG
VEVIRQVRAR SAEHLPYILL LTAKNGTDDV IRGLDAGADD YVGKPFSLGE LRARIQVGRR
TVELHSRLQE TQEALNHQAT HDPLTGVMNR RAIIDHLEKE LSRVKRDGGS LSIGILDIDH
FKRVNDRYGH QTGDEVLCGC VGVLGGLLRD YDLLGRLGGE EFLVVAPGTG DDCNHLYERL
RAAIASTKFT SRAKPVSVTV SIGVAACDGT AGLDELLAAA DDALYRAKRS GRDRVVQAGS
P
|
|---|
| |