| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU2252 |
|---|
| Symbol | |
|---|
| ID | 2687495 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sulfurreducens PCA |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002939 |
|---|
| Strand | - |
|---|
| Start bp | 2467334 |
|---|
| End bp | 2468446 |
|---|
| Gene Length | 1113 bp |
|---|
| Protein Length | 370 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637126945 |
|---|
| Product | heptosyltransferase family protein |
|---|
| Protein accession | NP_953301 |
|---|
| Protein GI | 39997350 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
|---|
| TIGRFAM ID | [TIGR02201] lipopolysaccharide heptosyltransferase III, putative |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.548459 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACCGCAT CACCCTCCTC CATACTCATC ATCAATATCC GGCTCATCGG CGATGTCATC
CTGACCACGC CGCTCATCGG CATCCTGAAA AATGCATTCC CTGACGCAGC CATCGACTTT
CTGGTGAACC GGGGTACCGG CGAGTTTCTG GAAAAGGACC CACGGGTCAG GCGGGTCATC
TATTCGGAGA AGGGCTCGGT AGCTGCCGGT GGGGCGCGGG AAGGCGGCTA CTTCCGGGAT
ATTTTCCGGA GGTATGACCT GGCAATCAAT ATGAACGCCT CGGATCGGGG AAGCTTTGCC
GCTCTGCTGG CCGGGAAAAA GACGAGGGTC GGTTTCACTC TCGGAGACAA TTTTGGTCAG
GCTTTATGGA AGAAAATGCT CTTTCATCGC CTCATCCCGC TTCCCTGTCA GAATCATGTG
GCTCTGCTGT GCAAGTCCGT CGCGGATGCA CTCGGGCTGG CGGCAGACCG GCTCAGCGCA
TCTGTTCACT GGGATGCAGC CGACGCCGGG CGGGTGCGCC AGGTGTTGGA AAAAGCGAGA
CTCGACGGGG CCTACTTTGT CATCCATCCC TTTGCACGCT GGCGTTACAA GCTCTGGACC
ATGGAAAAAT TTGCCGAATT GAGCGACCGC GTTGCAGAGC GTTACGGTTT GAGGCCGGTA
TGGACGGCCT CCCCATCGGC AGTGGAAGTA TCGATGGTCC AGCAGGGGGC CGGGCTCTGC
CGCCATGCGC CTTTAGTGAT AAAGGGGGAG TTTAGTCTTA ATCAGATGGC GTGTCTTCTT
TCAGGCGCAT CCCTCTACAT CGGTCTCGAT ACGGCGGTGA CTCACATGGC GGCAGCAGCC
GGCATCCCTC TCGTTGCCCT CTATGGCCCC ACCGAATTGA ATCGCTGGTT CCCTTGGGAC
AATCAAGGTC CCCTTGAGCA GGTGCCTCCG CTTTCAGGCG GCCGGATCAT CGTTGTCCGT
AAGGAGGATC GGGAGTGTGT TCCGTGCGGG GAAGCGGGCT GTGGGGGAAG GGGAGAGGAG
AGCGCCTGCA TTCTCGAAAT AGAGGTGGAC GAAGTGATGG GTCGTGTCGA TCAGGTCGTA
TCTGCCCGCT GCGCGGACCG GGAGTCGAAA TGA
|
|---|
| Protein sequence | MTASPSSILI INIRLIGDVI LTTPLIGILK NAFPDAAIDF LVNRGTGEFL EKDPRVRRVI
YSEKGSVAAG GAREGGYFRD IFRRYDLAIN MNASDRGSFA ALLAGKKTRV GFTLGDNFGQ
ALWKKMLFHR LIPLPCQNHV ALLCKSVADA LGLAADRLSA SVHWDAADAG RVRQVLEKAR
LDGAYFVIHP FARWRYKLWT MEKFAELSDR VAERYGLRPV WTASPSAVEV SMVQQGAGLC
RHAPLVIKGE FSLNQMACLL SGASLYIGLD TAVTHMAAAA GIPLVALYGP TELNRWFPWD
NQGPLEQVPP LSGGRIIVVR KEDRECVPCG EAGCGGRGEE SACILEIEVD EVMGRVDQVV
SARCADRESK
|
|---|
| |