Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU2236 |
Symbol | relA |
ID | 2687525 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | - |
Start bp | 2450613 |
End bp | 2452763 |
Gene Length | 2151 bp |
Protein Length | 716 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637126929 |
Product | GTP pyrophosphokinase |
Protein accession | NP_953285 |
Protein GI | 39997334 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.188084 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATACGGC TCAACGATAT CCTCGATAAG GTCGTCACCT ACAATCCCGT AGCCGACCTG GACCTGATCC GCAAGGCCTA TGTCTACTGT GCAAAGGTCC ACCAGGGACA GACGCGTCTT TCGGGAGAGC CTTATCTCGT TCACCCCATG GAGGTGGCGG GCGTACTGGC TGACCTGAAG CTCGACGTGC CGACAGTGGT GACCGGGCTG CTCCACGACA CCATCGAGGA TACCCTCACG ACCCGGGAGG AGCTGGAGGG GATGTTCGGC GCCGAGGTGG CAAACCTGGT AGACGGCGTC ACCAAAATCG GCAAGATCCA CTTCAAGACC AAAGAGGAGA GTCAGGCCGA GAACTTCCGC AAGATGTTGC TGGCCATGGC CAACGACATC CGGGTAATCC TCGTCAAGCT CGCCGACCGC CTCCACAACA TGCGGACGCT CCAGTACCAG CCCGAGCCGA AGCAGCGCTC CATCTCCCGC GAGACCCTCG ATATCTATGC TCCTCTTGCC AATCGTCTCG GTATTTCATG GATCAAGAGC GAGCTGGAAG ACCTTTCCTT CCGTTACCTG GAACCACAGA TCTACTACGA CCTGGCTTCA AAGGTTGCCA AGAAGAAGAA GGAGCGGGAA AGCTATGTGG AGGAGGTGCG GCAGATCATC GTCTCCAAGC TTGCCGAACA CGACCTCAAG GGTGACGTAT TCGGCCGGAG CAAACACCTT TACTCCATCT GGCGCAAAAT GCAGGCCCGC AATGTGGACA TTGACCAGAT CTATGACCTG GTGGCGATCC GGGTCATGGT GAACGATATC CGGGAGTGCT ATGAGGTCCT CGGGATCATC CATTCGACCT GGAAGCCGAT CCCTGGCCGC TTCAAAGACT ATATCGCCAT GCCCAAGGGG AACATGTACC AGTCGCTCCA TACGACGGTC ATCGGTCCGC ACGGGGAGCG CATGGAGGTC CAGATCCGCA CGTCCGACAT GCACCGGGTG GCGGAAGCCG GTATCGCGGC TCACTGGAAG TATAAAGAAG GGAAGGGGTA CGACGAAAAA GAGGTCAAGC GGTTCGCCTG GCTGAGGCAG CTGCTGGAGT GGCAGCAGGA GCTTCAGGAT TCCCACGAGT TCATGAATAC GGTCAAGGTG GAACTTTTCC CCGAGGAGGT CTACGTCTTT ACTCCCAGAG GGGACGTGAA GAGTTTTCCA AAGGGGTCGA CCCCCATTGA TCTGGCCTAT ACCATCCACA CCGACATCGG GCATCGCTGT GTGGGCGCCA AGGTGAACGG CAAGCTGGTT CCCCTCAAGT ATGAGCTGAA GAACGGCGAT ATCGTGGAGG TGATCACCTC TCCGCACCAC ACGCCGAGCA AGGACTGGCT GAAGATCGTC AAGAGCTCCC GTGCCCGCAA CAAGATCCGG GCATGGATCA AGACAGAGGA GCGGGTCCGG AGCATCTCTC TCGGCAAGGA GATCCTTGAG AAGGAGTTCC GGCGTTATTC TCTCAATCTG GCCAAGCTGC AGAAGGCTGG AGAGATTAAG CGAGTGGCCT CGGAGTTCGG CCTTTCCACC GATGATGACG TCATGGCCGC CGTTGGTTAT GGCAAACTCT CGGCAAACCA GGTGATCGGC AAGCTGCTTC CCGAGGAAAA GCTTCAGGAA CGCCAGGAAC AGAAGGAATC CCGTATCGGG AAGATGATCG GCAAGCTCAC CGGCTCGTCT CCCAGCGCCA TCCAGATCGG CGGGGTCGAC GATGTTCTTG TGCGTTTCGG CAAGTGCTGC AACCCGGTTC CCGGAGACGA TATCATCGGC TTCATCACCC GGGGAAGAGG GGTCACGATC CATACCGCCG ACTGTCCCGT TGCCCTGGAA AACGACCCGG AGCGCCGTAT CGCCGTCACC TGGAACCGTG AGCGCAAGGC TGCCCTGCCG GTGAAAATCC GAGTTTCCTG TCACGACCAG AAGGGTATTC TCGCCAACAT CACCCAGGCC ATCACCGATT GTGAAGCAAA CATCTCCAGC GCGTCGATCC AAAGCACGGT CGACAAGCGC GGGGTCAATA TCTTTGAAGT GGACGTCACC GACCTGGATC ACCTGAAGCG GGTAATGAAC AACATCATGA AGCTGAGCGG TGTCATTTCG GTCGAGCGAA TGAAAAATTG A
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Protein sequence | MIRLNDILDK VVTYNPVADL DLIRKAYVYC AKVHQGQTRL SGEPYLVHPM EVAGVLADLK LDVPTVVTGL LHDTIEDTLT TREELEGMFG AEVANLVDGV TKIGKIHFKT KEESQAENFR KMLLAMANDI RVILVKLADR LHNMRTLQYQ PEPKQRSISR ETLDIYAPLA NRLGISWIKS ELEDLSFRYL EPQIYYDLAS KVAKKKKERE SYVEEVRQII VSKLAEHDLK GDVFGRSKHL YSIWRKMQAR NVDIDQIYDL VAIRVMVNDI RECYEVLGII HSTWKPIPGR FKDYIAMPKG NMYQSLHTTV IGPHGERMEV QIRTSDMHRV AEAGIAAHWK YKEGKGYDEK EVKRFAWLRQ LLEWQQELQD SHEFMNTVKV ELFPEEVYVF TPRGDVKSFP KGSTPIDLAY TIHTDIGHRC VGAKVNGKLV PLKYELKNGD IVEVITSPHH TPSKDWLKIV KSSRARNKIR AWIKTEERVR SISLGKEILE KEFRRYSLNL AKLQKAGEIK RVASEFGLST DDDVMAAVGY GKLSANQVIG KLLPEEKLQE RQEQKESRIG KMIGKLTGSS PSAIQIGGVD DVLVRFGKCC NPVPGDDIIG FITRGRGVTI HTADCPVALE NDPERRIAVT WNRERKAALP VKIRVSCHDQ KGILANITQA ITDCEANISS ASIQSTVDKR GVNIFEVDVT DLDHLKRVMN NIMKLSGVIS VERMKN
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