Gene GSU2229 details

Gene Information

• Locus tag: GSU2229
• Symbol: tmk
• ID: 2687571
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter sulfurreducens PCA
• Kingdom: Bacteria
• Replicon accession: NC_002939
• Strand: +
• Start bp: 2444982
• End bp: 2445623
• Gene Length: 642 bp
• Protein Length: 213 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 637126922
• Product: thymidylate kinase
• Protein accession: NP_953278
• Protein GI: 39997327
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0125] Thymidylate kinase
• TIGRFAM ID: [TIGR00041] thymidylate kinase

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.558567
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGCTATT TCATTACATT CGAAGGCATC GAGGGGTGCG GCAAAACGAC CCAGATCAAG 
CGGGCGGCGC AGTCCCTCAG GGAGGCGGGC CACCGGGTGG TCGTTACGCG CGAACCGGGC 
GGTTGCCCCA TTGCCGACGA CATCCGGGCT ATCCTGCTGG ACGCCGGCAA CAGCGCCATG 
GTACCCACGA CGGAGCTCCT CCTCTACGCG GCGGCGCGTG CCCAGCACGT GGCCGAGGTC 
ATCGCGCCCG CCCTGGCGGA GGGTGCCGTA GTCCTCTGCG ATCGCTTTAC CGATTCCACT 
CTCGTCTACC AGGGCTTCGG CCGCAACCTG GACCGGGATC TCATTGCCCG GCTCAACACG 
CTGGCTGCGG GACAGATCCG GCCGGACCTC ACAATCCTCC TCGACTGCCC CGTGGCGGTG 
GGGCTTGCCC GGGCCGCGGC GCGGATCAAC TCCCGGCAGA CAAACCGGGA GGAACGTTTC 
GAGCGGGAAT CGCTCCTCTT TCACGAGCGG GTGCGGGAGG GATTCCTCTC CCTGGCCGGC 
GGGGAACCCC ACCGGTTCGC CGTGATCGAC GGAAATGATG GAGTAGAAGC GACGGCGACG 
GCCGTGGCGG ATGTACTCCT GAACCGCGTG CCCCGGAGGT AG 

 

Protein sequence

MGYFITFEGI EGCGKTTQIK RAAQSLREAG HRVVVTREPG GCPIADDIRA ILLDAGNSAM 
VPTTELLLYA AARAQHVAEV IAPALAEGAV VLCDRFTDST LVYQGFGRNL DRDLIARLNT 
LAAGQIRPDL TILLDCPVAV GLARAAARIN SRQTNREERF ERESLLFHER VREGFLSLAG 
GEPHRFAVID GNDGVEATAT AVADVLLNRV PRR