Gene GSU2007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGSU2007 
Symbol 
ID2685544 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sulfurreducens PCA 
KingdomBacteria 
Replicon accessionNC_002939 
Strand
Start bp2200668 
End bp2201741 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content59% 
IMG OID637126698 
Productbranched-chain amino acid ABC transporter, permease protein 
Protein accessionNP_953056 
Protein GI39997105 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4177] ABC-type branched-chain amino acid transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.551976 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGACAGA TCAATGCTCT GATAACCAAT ACGCGGGGGG CCTCGCCGGT GTCGATCATC 
CTCGGGGTGG TCATCCTCGC GGGCCTATTC CTCTTTCCCA AAGCAGTGGA GAGCCCCTAC
GCCCTTCACA TCATGATCCT CTTCTTCCTC AGCACCATCA TGGGGGAGAG CTGGAACATC
GTCGGCGGCT ACACGGGACA GTACTCAGTG GGCCATGCCG CCTATTTCGG GGCCGGCGCC
TACACCACCA TGGTTCTGAT GCAGTTCAAG CAGATCCCCC CTTGGTACGG GATGATTGCC
GGCATCGCAG TGGCGCTGGT GGTTTCCCTC ATCATCGGCA GCATCTGCTT CCGACTCCGG
GGACCCTATT TTGTTCTCGC GTCCATTGCC GTGGCCGAGA TTATGCGCCT CTGCGCCATG
AATCTGAAGG ACCTGACCAA CGGTGCCGAA GGTATCCTGG CCACAGACAT CCCCCCTTTC
ACCCTGGGTG GGACGGTAAT CACCGACTTT CTCTCCAAGG TCCCCTTCTA CTACATCGGC
CTGGTGATCG CCATCCTGAC CATCGCAGTC ACCTATCTGG TGCAGCACTC CAAACTCGGC
TACTACTTCC AGGCCATCCG CGAAGACCAG GATGCGGCCC ATTCTCTCGG GATCAACCTC
TCTATCTACA AGAACATCGC CCTGGCCATC TCGGCGGTCT TCACGTCGCT GGCAGGCAGC
TTCTACGCCA TCTACATCGG CTTTATCGAC CCCCCTACAG TGCTCGCCCT GGACATCTCG
GTTCAGATCG TTCTTATCTG CATCATCGGC GGCATCGGCA CCATCTGGGG ACCGGTGGTG
GGGTCACTGG TGCTGGTACC TCTCTCCGAA GCCCTGCGCA GCAACCTGAT CGCCCAGGGA
ATATTCAAGA TCGGCCTGGC CAGCGAGGAG TCCGGAGTCG GGATCTTCCT CAAGGACCAC
CTGGCCCACG CCCACGCCCT GATCTACGGT ATCCTGGTCG TAGTGGTCAT CCTCTTCATG
CCCGACGGCG TCCTGGGCTA CGTCAAGAAA CTCACCAAGA AAAAGGCGAT GTGA
 
Protein sequence
MRQINALITN TRGASPVSII LGVVILAGLF LFPKAVESPY ALHIMILFFL STIMGESWNI 
VGGYTGQYSV GHAAYFGAGA YTTMVLMQFK QIPPWYGMIA GIAVALVVSL IIGSICFRLR
GPYFVLASIA VAEIMRLCAM NLKDLTNGAE GILATDIPPF TLGGTVITDF LSKVPFYYIG
LVIAILTIAV TYLVQHSKLG YYFQAIREDQ DAAHSLGINL SIYKNIALAI SAVFTSLAGS
FYAIYIGFID PPTVLALDIS VQIVLICIIG GIGTIWGPVV GSLVLVPLSE ALRSNLIAQG
IFKIGLASEE SGVGIFLKDH LAHAHALIYG ILVVVVILFM PDGVLGYVKK LTKKKAM