Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU2007 |
Symbol | |
ID | 2685544 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | + |
Start bp | 2200668 |
End bp | 2201741 |
Gene Length | 1074 bp |
Protein Length | 357 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637126698 |
Product | branched-chain amino acid ABC transporter, permease protein |
Protein accession | NP_953056 |
Protein GI | 39997105 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.551976 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGACAGA TCAATGCTCT GATAACCAAT ACGCGGGGGG CCTCGCCGGT GTCGATCATC CTCGGGGTGG TCATCCTCGC GGGCCTATTC CTCTTTCCCA AAGCAGTGGA GAGCCCCTAC GCCCTTCACA TCATGATCCT CTTCTTCCTC AGCACCATCA TGGGGGAGAG CTGGAACATC GTCGGCGGCT ACACGGGACA GTACTCAGTG GGCCATGCCG CCTATTTCGG GGCCGGCGCC TACACCACCA TGGTTCTGAT GCAGTTCAAG CAGATCCCCC CTTGGTACGG GATGATTGCC GGCATCGCAG TGGCGCTGGT GGTTTCCCTC ATCATCGGCA GCATCTGCTT CCGACTCCGG GGACCCTATT TTGTTCTCGC GTCCATTGCC GTGGCCGAGA TTATGCGCCT CTGCGCCATG AATCTGAAGG ACCTGACCAA CGGTGCCGAA GGTATCCTGG CCACAGACAT CCCCCCTTTC ACCCTGGGTG GGACGGTAAT CACCGACTTT CTCTCCAAGG TCCCCTTCTA CTACATCGGC CTGGTGATCG CCATCCTGAC CATCGCAGTC ACCTATCTGG TGCAGCACTC CAAACTCGGC TACTACTTCC AGGCCATCCG CGAAGACCAG GATGCGGCCC ATTCTCTCGG GATCAACCTC TCTATCTACA AGAACATCGC CCTGGCCATC TCGGCGGTCT TCACGTCGCT GGCAGGCAGC TTCTACGCCA TCTACATCGG CTTTATCGAC CCCCCTACAG TGCTCGCCCT GGACATCTCG GTTCAGATCG TTCTTATCTG CATCATCGGC GGCATCGGCA CCATCTGGGG ACCGGTGGTG GGGTCACTGG TGCTGGTACC TCTCTCCGAA GCCCTGCGCA GCAACCTGAT CGCCCAGGGA ATATTCAAGA TCGGCCTGGC CAGCGAGGAG TCCGGAGTCG GGATCTTCCT CAAGGACCAC CTGGCCCACG CCCACGCCCT GATCTACGGT ATCCTGGTCG TAGTGGTCAT CCTCTTCATG CCCGACGGCG TCCTGGGCTA CGTCAAGAAA CTCACCAAGA AAAAGGCGAT GTGA
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Protein sequence | MRQINALITN TRGASPVSII LGVVILAGLF LFPKAVESPY ALHIMILFFL STIMGESWNI VGGYTGQYSV GHAAYFGAGA YTTMVLMQFK QIPPWYGMIA GIAVALVVSL IIGSICFRLR GPYFVLASIA VAEIMRLCAM NLKDLTNGAE GILATDIPPF TLGGTVITDF LSKVPFYYIG LVIAILTIAV TYLVQHSKLG YYFQAIREDQ DAAHSLGINL SIYKNIALAI SAVFTSLAGS FYAIYIGFID PPTVLALDIS VQIVLICIIG GIGTIWGPVV GSLVLVPLSE ALRSNLIAQG IFKIGLASEE SGVGIFLKDH LAHAHALIYG ILVVVVILFM PDGVLGYVKK LTKKKAM
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