| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU1927 |
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| Symbol | |
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| ID | 2688352 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sulfurreducens PCA |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002939 |
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| Strand | - |
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| Start bp | 2105212 |
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| End bp | 2107194 |
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| Gene Length | 1983 bp |
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| Protein Length | 660 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637126618 |
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| Product | sensory box/response regulator |
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| Protein accession | NP_952976 |
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| Protein GI | 39997025 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCAGCC GGCTTGTTCC CGACATCATC CTGCTCGATG TAGTAATGCC CGGCATGGGG
GGATTTGATG TCTGCCGGCG TATTCGCCGT CTGCCGGGAG GAGACCGCGT CCAGATCCTC
GTTATGACGA GTCTCGATGA TACCGGTGCC ATTGATGAAG CCTACGAGGC AGGGGCTTCG
GACTTCCTGG CCAAGCCGAT CGACTGGGTT CTGCTGCCCC GCCGTATCCG TTATCTACTG
CGCGCCAAAC TCGCTTTCGA TGAGCTTCAC AAGAGCAGGA CCATGCTGTA CAACGCTCAA
CGCATTGCTC GCCTGGGAAA CTGGGAGTTC GACCTGGAGA CCAACGTCTT TACCTGCTCC
GAGGAATCGT GCCGCATTTT CGGCATCAGG GACCATCGGC AGGGGAAGAG TCACCGGGCC
CTGATGCGCC GGGTGCATCC CGAAGACCGG GTAACGGTCA AGAAGGCCAT CTTTCAGGCG
TTCCGGACCG GTGTCGGCTA CTGCATGGAT CACCGGATCG TTCTCGATGA TGGTGTTGAG
CGGATCGTCA GCCAGCATGC CGAGCTTCTG TCCGCAGATG ACGGGCGGAC GTCAAGGCTG
GTCGGAACGG TCCACGACAT AACCGAGCGA ACCCTTGCCG AGGAGCGGAT TCGCTACCTT
GCCCATCACG ATACTCTGAC GGCACTGCCC AACCGGTTCC AGTTCGAGGA GCGAATGGAA
CAGGCCCTGG CCTTTGCCCA GCGCAACGGC TTCATGATGG CAGTCCTGTT CCTGGATCTC
GACCACTTCA AAAAGGTGAA CGATACTCTG GGGCATCATG CGGGCGACCG GCTGCTTCAG
GAGGCGGCCG GCCGGCTTAT GAAATGCCTG CGGCGCAGCG ATACGCTCAC CCACGCTTCC
CGCGAGGATG CGAGCCCCTT CATCTCCCGC ATGGGCGGGG ACGAGTTCAC CATTCTGCTG
ACCGATCTGG CCCACCCCCA GGATGCCGCC AGGGTCTCGC AACGCATCAT CACCGCCCTG
TCCAAGCGTT ATGTGATCGG CGGCCACGAG GTTTTCGTGG GGGCAAGCAT CGGCATCAGT
CTCTTTCCCT CCGACGGCGA GGACTGCGAT CAGCTTTTGC GTAACGCGGA TACGGCCATG
TATCACGCCA AAGAACTGGG CCGCAATACC TATCAGTACT ATTCGGGCTC TATGAACGCC
ATGGCGCTCG AGCGGCTGAC CCTGGAAAAC AACCTGCGCT GGGCGCTCAA ACGGAATGAA
TTCCGCCTCT GCTACCAACC ACAGCTGGAT GCGGCCTCGG GGCGCGTGGT GGGGATGGAG
GCTCTGCTGA GCTGGCATCG GCCGGGGTGT GATGTAGTCC CGCCTGACGA TTTCATCCCC
TTGGCCGAGG AAACCGGCCT TATCGCATCG ATTGGCGAGT GGGTCCTCTG GAACGCTTGT
GCCCAGGCGG TTACCTGGCT CCACGAGGGG CTCCCGCCGG TACGGGTGGC GGTCAATCTT
TCCAGCCTCC AATTCCGGTC GCGTCGTTTG GCCGAGTTGG TGAGGAAGGT GCTGCGCGCC
ACCGGGTTGC CGCCATCGCA TCTGGAGCTG GAGATTACCG AGGGGGTCTT CATGTCCAAC
GAAGAGGATG CTGCTGTTGT CATTCGCGAC CTAAAGAAGA TGGGGGTCCG CTTTTCCGTC
GACGATTTCG GCACCGGCTA CTCTTCCCTC AGCAGGCTGT CGCGCTTCCC GCTCGATGCT
CTCAAGATCG ACCGCTCCTT TGTCCGTGAC ATTTCAGCCG ATCCGGCCGC GGCGGGCCTC
ACAGCCGCCA TTATTGCCAT GGCCCGCAAT CTCGGCCTGA ATGTTATTGC CGAAGGGGTC
GAAACCCATG AACAGTTTGC CTTTCTCCGG GCAAACGGCT GCGCCGAAGT ACAGGGATTC
CTCTTCAGTC AGCCGCTTAA CCCTGATGCA GCCGCAGCGT TCCTGCGCGC TCGGTCGCGC
TAG
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| Protein sequence | MFSRLVPDII LLDVVMPGMG GFDVCRRIRR LPGGDRVQIL VMTSLDDTGA IDEAYEAGAS
DFLAKPIDWV LLPRRIRYLL RAKLAFDELH KSRTMLYNAQ RIARLGNWEF DLETNVFTCS
EESCRIFGIR DHRQGKSHRA LMRRVHPEDR VTVKKAIFQA FRTGVGYCMD HRIVLDDGVE
RIVSQHAELL SADDGRTSRL VGTVHDITER TLAEERIRYL AHHDTLTALP NRFQFEERME
QALAFAQRNG FMMAVLFLDL DHFKKVNDTL GHHAGDRLLQ EAAGRLMKCL RRSDTLTHAS
REDASPFISR MGGDEFTILL TDLAHPQDAA RVSQRIITAL SKRYVIGGHE VFVGASIGIS
LFPSDGEDCD QLLRNADTAM YHAKELGRNT YQYYSGSMNA MALERLTLEN NLRWALKRNE
FRLCYQPQLD AASGRVVGME ALLSWHRPGC DVVPPDDFIP LAEETGLIAS IGEWVLWNAC
AQAVTWLHEG LPPVRVAVNL SSLQFRSRRL AELVRKVLRA TGLPPSHLEL EITEGVFMSN
EEDAAVVIRD LKKMGVRFSV DDFGTGYSSL SRLSRFPLDA LKIDRSFVRD ISADPAAAGL
TAAIIAMARN LGLNVIAEGV ETHEQFAFLR ANGCAEVQGF LFSQPLNPDA AAAFLRARSR
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