| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU1921 |
|---|
| Symbol | rpsB |
|---|
| ID | 2685346 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sulfurreducens PCA |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002939 |
|---|
| Strand | - |
|---|
| Start bp | 2099339 |
|---|
| End bp | 2100094 |
|---|
| Gene Length | 756 bp |
|---|
| Protein Length | 251 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637126612 |
|---|
| Product | 30S ribosomal protein S2 |
|---|
| Protein accession | NP_952970 |
|---|
| Protein GI | 39997019 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0052] Ribosomal protein S2 |
|---|
| TIGRFAM ID | [TIGR01011] ribosomal protein S2, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.264289 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGAACA TCACCATGAA GGAGCTTCTG GAGGCCGGTG TTCATTTCGG CCACCAGACC
AAGAGATGGA ACCCGAAGAT GAAGCCATAT ATCTTCGGGG CGCGTAACGG TATTTACATT
ATCGACCTCC AGAAGACCGT ACGCCTCTTC AAGAATGCGT ATAATTTCGT TCGTGAGAAC
GCCCAGGCTG GCGAAACGAT GCTCTTCGTG GGCACCAAGA AGCAAGCCCA GGATGCCATC
GGCGAAGAAG CAGTCCGTTG TGGCATGTAT TTCGTCAACC AGCGCTGGCT TGGCGGCATG
CTCACCAACT TCGTCACCGT CAAGCAGAGC ATCGACCGCC TCAAGCGGCT GGATGCCATG
TTCGCCGACG GCTCCATTGA AGCGTACACC AAGAAGGAAG CTCTGCAGCT TGAAAAAGAG
CGGGAGAAGC TGGAAAAGAT TCTCGGCGGC ATCAAAGGGA TGGGCAAGCT TCCCGGCGCG
CTCTTCGTGA TCGACCCCAA GAATGAGACT ATCGCCATCA GCGAGGCCAA GAAGCTGGGT
ATTCCCGTTG TGGCCGTGGT TGACACCAAC TGTGACCCCG ATCCCATCGA CTATGTAATT
CCTGGCAATG ACGACGCCAT CCGCGCCATT CGCCTGCTCA CTTCCAAGAT GGCTGACGCG
GTCATCGAGG GCTCCCAGGC ACGTGACGCC GTTCTTCAGA CCGGCGACGA GGAGGCTATG
GAAGCCGCTG CGGAAGAGAG TGGCGCCGAG GCCTGA
|
|---|
| Protein sequence | MSNITMKELL EAGVHFGHQT KRWNPKMKPY IFGARNGIYI IDLQKTVRLF KNAYNFVREN
AQAGETMLFV GTKKQAQDAI GEEAVRCGMY FVNQRWLGGM LTNFVTVKQS IDRLKRLDAM
FADGSIEAYT KKEALQLEKE REKLEKILGG IKGMGKLPGA LFVIDPKNET IAISEAKKLG
IPVVAVVDTN CDPDPIDYVI PGNDDAIRAI RLLTSKMADA VIEGSQARDA VLQTGDEEAM
EAAAEESGAE A
|
|---|
| |