Gene GSU1906 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGSU1906 
SymbolleuA 
ID2688449 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sulfurreducens PCA 
KingdomBacteria 
Replicon accessionNC_002939 
Strand
Start bp2083813 
End bp2085351 
Gene Length1539 bp 
Protein Length512 aa 
Translation table11 
GC content54% 
IMG OID637126597 
Product2-isopropylmalate synthase 
Protein accessionNP_952955 
Protein GI39997004 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0119] Isopropylmalate/homocitrate/citramalate synthases 
TIGRFAM ID[TIGR00973] 2-isopropylmalate synthase, bacterial type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00355798 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGAGC AGAAAACTAT CAAGATATTC GATACAACAC TGCGTGACGG AGAACAGTCT 
CCCGGCAACA GTATGAACAT CGAGGAAAAA CTCAGGGTTG CCAAGCAGCT CCAAAAACTG
AACGTAGATG TAATTGAAGC CGGTTTTCCC ATCGCGTCTG AGGGTGACTT TGAAGCGGTC
ATGCGGGTTG CACAGACCAT TAAGGGCCCT GAGATTGCGG GTCTGTGCCG CGCCAACGAC
AAGGATATAG ACAGGGCCTG GGAGGCTCTC AAGTATGCTG GCGAGAAGGG GCGTATCCAT
ACCTTTATTG CCACCTCTGA TATCCATATG AAGCACAAGC TGAAGATGTC CCCGTCCCAG
GTAATGGATG CGGCGGTAAA GGCGGTGAAG AGGGCTAAGT CGTACACTCC CAACGTGGAG
TTTTCCTGCG AGGACGCTGT ACGAACCAAC CTGAAATTCA TGGCCGAGGT GGTAGAGGCA
GTCATTGATG CGGGGGTGAC CACCGTGAAT ATCCCCGATA CGGTGGGCTA TACCATTCCT
TTTGAATACT TCAATATCAT TAAGTATCTG AAGGAAAACG TTCCCAATAT CGAGAAGGCG
GTCATATCCG TCCACTGCCA CAACGACCTC GGTCTGGCGG TTGCAAACTC CATCGCCGCG
GTTCAGGCGG GCGCGGGCCA GGTTGAGTGC ACCATCAACG GTATTGGCGA GCGTGCAGGC
AACTGTTCCC TGGAAGAGTT TGTCATGGCA ATCCGGACTC GCCACGATAT CCTTCCCTTT
AAGACGAACG TGGCAACGGA CCAGATTGTG CCGGCCAGCA GACTTCTTTC TACCATCACC
GGCATTGGCG TTCAGCCCAA CAAAGCTGTT GTCGGCGCCA ATGCCTTTGC TCACGAGTCG
GGCATTCATC AACACGGCGT CCTGATGGAA AAGTCCACTT ATGAAATTAT GACCCCGGAA
TCGGTTGGGC TCCGGGCCAA TGTTCTGGTT CTCGGCAAGC ATTCTGGTCG TCACGCTTTT
AAAAAGCGCC TTACCGAACT GGGCTATGAG TTGAGCGACG AGGATCTGAA TAAAGCCTTC
GAGCGGTTCA AGGCTCTTGC GGATATGAAG AAGGAGGTTT TCGACGAAGA TCTGGACGCC
ATCGTGGCGG ACGAAGTTAT GCGCCCCTCC GAGAAGTATC GGTTGGCACA TATCACGGTG
ACCTGCGGAT CGTTTGCGGT GGCAACAGCA ACAGTGCAGA TGGAGATCGA CGGGGTCGCC
GTGCGTACTG CAGAGCTGGG GGATGGTCCT GTCGATGCCA CACTCAAGGC CATCAAAAAG
CTCACCAAGA CCAAGGCCCG ACTCCAGCAG TACAATGTAG GCTCCATTAC CGGTGGTACC
GATGCTCAGG GCGAAGTGAC AGTGCGCCTC GTTGACGGTG ATGAGACGGT GGTCGGCCGC
GGTTCATCCA CCGACATCAT CGAGGCATCG GCAAAAGCCT ATATTAACGC CCTCAACCGT
CTTCATTTCA GGAAAGAACG GGCACCCGAG AGCCTGTAA
 
Protein sequence
MAEQKTIKIF DTTLRDGEQS PGNSMNIEEK LRVAKQLQKL NVDVIEAGFP IASEGDFEAV 
MRVAQTIKGP EIAGLCRAND KDIDRAWEAL KYAGEKGRIH TFIATSDIHM KHKLKMSPSQ
VMDAAVKAVK RAKSYTPNVE FSCEDAVRTN LKFMAEVVEA VIDAGVTTVN IPDTVGYTIP
FEYFNIIKYL KENVPNIEKA VISVHCHNDL GLAVANSIAA VQAGAGQVEC TINGIGERAG
NCSLEEFVMA IRTRHDILPF KTNVATDQIV PASRLLSTIT GIGVQPNKAV VGANAFAHES
GIHQHGVLME KSTYEIMTPE SVGLRANVLV LGKHSGRHAF KKRLTELGYE LSDEDLNKAF
ERFKALADMK KEVFDEDLDA IVADEVMRPS EKYRLAHITV TCGSFAVATA TVQMEIDGVA
VRTAELGDGP VDATLKAIKK LTKTKARLQQ YNVGSITGGT DAQGEVTVRL VDGDETVVGR
GSSTDIIEAS AKAYINALNR LHFRKERAPE SL