Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU1842 |
Symbol | |
ID | 2688629 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | - |
Start bp | 2008304 |
End bp | 2010649 |
Gene Length | 2346 bp |
Protein Length | 781 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637126532 |
Product | polysaccharide biosynthesis/export domain-containing protein |
Protein accession | NP_952892 |
Protein GI | 39996941 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.749239 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGCTATA ACGCAGATCG CAAGCTGGTG CTTTCCTCCG AGGAGGTAAG GGTGATACCC ACGGCCCCGG ATGCGTCCGC TTCGTCCCTG GAGCGTGCCT TTGCCCGCCA GAGCCCGACG CTGCTGGACA AGCTCGAACC GACTCCCCTC AACAGATCGC TCCGTCAGTT CGGGTATGAG TTTTTTAAAA ACAGTCTCGC AAGTCTGGCC GTAACTGAAA ATCTGCCCGT GGGCCCCGAC TATGTTGTTG GTCCGGGCGA TTCCATCAGA ATTGATGTGT GGGGGAGCTT CACCGCCCGC TATGAGCCGA CTGTGGACCG CAACGGCGAG ATCCTGATCC CGCGCATTGG TCCGGTAAAG CTCTGGGGGC TGACCTACGG CCAGGCTCGG GAAGCCATAG ACAAAGCACT GGCCCGCTAC TACAAGGGGT ACGAGCTGAA CGTGACCCTG GGGAGCCTCA GGACCATCCA GGTTTACGTG GTGGGTGAGG TGGAAACGCC CGGGGTGTAC AGTGTCAGCT CCCTGGCCAC GGTGGTCAAT GCCCTGGCCG CCGCCGGGGG GCCTTCGAAG AACGGGAGCC TGCGGTCGAT CAGGGTGTCG AGACCGGGAG TCGAACCCCG TTCGATCGAT CTGTACGACA TGTTTCTCAC TGGTGACCGC AGCAATGACG TGAGGCTGCA AAACGGCGAC ACGGTATTTG TGCCGGTGAT CGGGCCGGTT GCTGCCGTGG CGGGCGAAGT GCGGCGTCCC GGCATCTACG AGTTGAAGGG CGCGACGCCG CTCGCCCGGC TGGTGGCCAT GGCGGGGGGG ATCACTGCAG CGGGAGATAC GGGGCGTATC CAACTGGAGC GGATCGAGGG GAACAGCGCA CGGATAGTGC TCGATTATGA GCCCAAAGGG GGCGACCTGG AGGCCGAACT CGCCCGGGTG GAACTGAAGG ACCGTGACAT GGTCACCGTG TTCCCGGTGT TCGATGCCGT GCGCAAGGTG GTCACCCTCA CGGGGAACGT GACGCGGCCC GGTGCCTATC AGTTGAAGGA GGGAATGCGG GTCAGGGATA TTCTTCCTGA TCCGTCGGTC CTTCTCCCCG AATCGTATCT GGAGTCGGCC GAGATTACCC GTCTTGCTCT TCCCGAGTAC CGCCGGGAAG TGGTCACCTT CAATCTGCGG GCCGCCATGC AGGGGGATCC CAAGGAGAAC CTTCCCCTTC AGGAGCAGGA CACGGTGCGG GTGTTCTCCC GGGCCGAGAT GATTGAGAAG CATACGGTGT CCATCAGCGG GGCGGTGCTC AATCCGGGCA GCTATGAGTA TTTTCCGCGC ATGACGGTGC GCGACCTGGT GACCGTCGCC GGCAGTCCCA AGCGAAATGC TTTTCTGGGC AGTGCGGAGC TGACCAGGAT CAATGTCAAC GGCGACGGAG CGCGGGCGAG TAGGCAGGAT ATCAATCTCG AAAAGGCCAT GGCGGGCGAT CCCGATCATA ACCTCCCCCT GCAGACCGAC GACGTCCTCA TCGTCCGGAG CATCGAGAAC TGGCTTGAGG CCAGCGACCG GTTCGTGACC CTGCGGGGCG AGGTGAAGTT TCCCGGCACC TATTCCATTG CCAAGGGAGA ACGACTGAGT TCGGTCATTG CCCGGGCCGG GGGCTATACC GAACATTCCT GCCTGAAGGG GGCCAAGTTC ACCCGCCGGT CGGTCAGAGA GGAGCAGCAG CGCCGCATGG ACGAGGTGAT CGCCCGGACC GAGCAGGATG TCTACCGCAA GCAGGCGGAA CTCTCGTCGG TGGCTACATC ACGCGAGGAG CTGGAGGCCA CCAAGGCCGC CCTCGACGGT CTGTTGCGGA GTCTGGCGAA GCTGAAGACC ACCAGGGCCG AGGGGCGGGT GGTGATCCGG CTGGCGCCGG TCGAGGCGCT TGCCCACAGC TCCTATGACC TTGAACTGGA AGGCGGGGAT GAACTCTCCA TACCCCCAAC CCCGAGCGTG GTGTCGGTCA TGGGGTCCGT CTACAACCCC ACGTCGTTCC TGCACATTTC AGAGCGGGAC GTGGCCTATT ACCTGGAACG TTCCGGCGGG GCTACCCGTG ATGCCGAATT GGATGACATG TACATTATCA AGGCCGACGG ATCGGTCTTC AGCAGGCAGC AATCGTCCTT CGGCATTCGC TGGGACGACT ATGCCCGGCG CTGGACGTTC GGCGGATTCC TGTCGTCCCC CCTGGAGCCC GGAGATACGC TCGTGGTGCC GCAGAAGCTC GAGCGAACCG CCTGGATGCG CGAGATCAAG GACATAACAA CCATCCTGTC GCAGGTAGCC ATAACCGCCG GCGTGATCAT CGCGGCAGGT CTCTAG
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Protein sequence | MGYNADRKLV LSSEEVRVIP TAPDASASSL ERAFARQSPT LLDKLEPTPL NRSLRQFGYE FFKNSLASLA VTENLPVGPD YVVGPGDSIR IDVWGSFTAR YEPTVDRNGE ILIPRIGPVK LWGLTYGQAR EAIDKALARY YKGYELNVTL GSLRTIQVYV VGEVETPGVY SVSSLATVVN ALAAAGGPSK NGSLRSIRVS RPGVEPRSID LYDMFLTGDR SNDVRLQNGD TVFVPVIGPV AAVAGEVRRP GIYELKGATP LARLVAMAGG ITAAGDTGRI QLERIEGNSA RIVLDYEPKG GDLEAELARV ELKDRDMVTV FPVFDAVRKV VTLTGNVTRP GAYQLKEGMR VRDILPDPSV LLPESYLESA EITRLALPEY RREVVTFNLR AAMQGDPKEN LPLQEQDTVR VFSRAEMIEK HTVSISGAVL NPGSYEYFPR MTVRDLVTVA GSPKRNAFLG SAELTRINVN GDGARASRQD INLEKAMAGD PDHNLPLQTD DVLIVRSIEN WLEASDRFVT LRGEVKFPGT YSIAKGERLS SVIARAGGYT EHSCLKGAKF TRRSVREEQQ RRMDEVIART EQDVYRKQAE LSSVATSREE LEATKAALDG LLRSLAKLKT TRAEGRVVIR LAPVEALAHS SYDLELEGGD ELSIPPTPSV VSVMGSVYNP TSFLHISERD VAYYLERSGG ATRDAELDDM YIIKADGSVF SRQQSSFGIR WDDYARRWTF GGFLSSPLEP GDTLVVPQKL ERTAWMREIK DITTILSQVA ITAGVIIAAG L
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