| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU1838 |
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| Symbol | hrpB |
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| ID | 2688652 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sulfurreducens PCA |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002939 |
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| Strand | - |
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| Start bp | 2003813 |
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| End bp | 2006353 |
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| Gene Length | 2541 bp |
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| Protein Length | 846 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637126528 |
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| Product | ATP-dependent helicase HrpB |
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| Protein accession | NP_952888 |
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| Protein GI | 39996937 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1643] HrpA-like helicases |
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| TIGRFAM ID | [TIGR01970] ATP-dependent helicase HrpB |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0458406 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCGCC TTCCCGTTGA CGACGTCATC CCCGACCTGC TGACGGCCCT TGAGCAGAGG
AACGCCGCAG TACTTCAGGC GCCGCCGGGG GCCGGGAAAA CCACCCGCGT TCCCCTCGCG
CTCCTTGACG CTCCCTGGCT GAACGGCAAA CGGATTATCA TGCTGGAACC GCGCCGGCTG
GCCGCGACGA ATGCTGCCCG CTGGATGGCC CGCAGTCTGG GGGAGGAGGC GGGCGCCACA
GTGGGGTACG CCATCCGCTT CGACCGCCGG GTGTCTGCCC GAACCCGGGT GGAAGTGGTG
ACCGAAGGAA TCCTCACCCG TCGACTCCAG TCCGATCCGC TCCTTGAGGG GGTCGGTGCG
GTGATCTTCG ACGAGTTCCA CGAGCGGAGC ATCCATTCGG ATCTGGCCCT CGCCCTCTGC
CGCGATGTTC AGGCAGGGCT GCGGGAGGAC CTGCGGATCA TCGTCATGTC GGCAACCATG
GCAGCGGCGC CGGTCGCGGC CCTGCTCGGC GACGCACCGG TCATCACCAG CGAGGGGCGA
AACTACCCCG TTGCGCTGCG GCATATTCCG CCCAACGACC GGGAGAACCT CCCCTCGGCC
GTGGCGCGCG CCGTCCGAAT TGCAGTGCGC GAGTGCGAAG GGGATATCCT CGCGTTTCTC
CCCGGCGTCG GAGAGATCAG GCGCTGTGGC CAACTGCTCG CTGATGATCC GCCGTTGCAT
GCCCCGCTGG TGGTGCCCCT CTACGGCGAT CTGCCGTTCG TGGAGCAGGA GCGGGCGATT
CTGCCGGTCC CCGGCCGGCG CAAGGTGGTG CTGGCAACAA CCATTGCCGA AACGAGTCTC
ACCATCGAAG GTGTCCGCGT GGTTGTGGAC GGTGGCCAGA CCCGGCGGCT GAGGTATGAC
CCGGCCTCGG GGCTGAACCG GCTGGTCACC GAGCGGGTTT CCGCCGCATC GGCGACCCAA
CGGGCCGGTC GGGCCGGCCG CCTGGGACCG GGAACCTGCT ACCGCCTCTG GCCAGAGCAT
GACCAGCAGG CGCTCCTGGC GGCAGATCCC CCGGAAATCC TCATCGCCGA TCTGGCTCCG
CTGGCCCTTG ACCTGGCACA CTGGGGGGTA AGCGATCCTG CGTCCCTTGC CTGGCTCGAT
CCTCCTCCCC GCGGGGCACT GGAGGAGGCG AGAAACCTTC TGAAGTCCCT CGATGCCCTT
GACGGCCAGG GGATGATAAC CGAAACGGGA CGGCGCATGG CGGAGTTGCC GCTCCATCCT
CGTCTGGCCC ATATGCTGCT GCGCGCGACC GAGCGCGGCC CGGCACCTCT AGCGTGCGAC
GTGGCCGCGC TGCTCACGGA GCGGGACATC GTGCGTTCCG CCGGGACCGG TCAGGCCGCC
GAACGCGCCG GCTGCGACAT GCTCATCCGG GTAGAGGCCC TTGAACAGTG GCGGCAGGGA
AGAGGGGGGA GGGATCACCA GGTTGATTCT TCAGCCTGCC GGGCAGTGGA CCGGGTGGCA
TCACACCTGC GGCGCCTGAT TGCCCCGGAT GGAAAGGGGC ACGCGGTTGC GGATCCGGTT
CGGGAAACGG GGCTGCTGCT TTCGTGGGCA TATCCTGACC GGATCGCCCA GGCCCGTCCC
GGGGGCGAAC GGCGCTATCT TCTGGCCAAC GGCAGAGGGG CCTTGTTGTC GGAACGGAGT
TCCCTCCACG GGGAGCAGTT GCTTGTGGCC TATCTGGTGG AGCGCGGCGA GCGGGGGGAC
GACCTGATTC GCCAGGCGAG CGCCCTTGAC CCGGCGCGGT TCCACGAAGA GTTCTCCGGC
GACATCTACC GGCGGCGCAC GGTGGTTTGG GATGATCGGG AAGGGAGGGT GAGCGCCCGG
GATGAGGCCT GCTACGGTGC CATCGTTCTG GAGAGCCGTC CCGTCTCCGC CACGGGCGAT
GAGGTCCGTG CCGCCTTGCT GGCGGGACTG CGAGCCGGTC CGGGTATAAC GGCCCTGGGA
TGGACGCCGT CCGCCTGCCA GTTCCGGGCA CGAGTACGGT TTCTCGGCCG GGTCTGCCCT
GACGAAGGCT GGCCCGATCT TTCCGATGAA CGACTTCTGA AAACAATCGA GGTATGGCTC
GGCCCCTTCC TGGGCAAGGC CCGGAGCCTT GCCGACCTGG CGTCTATCGA TCTTCTGACG
CCGCTGAAAG CTCTGCTCTC CTGGGATCAG CTCCGTCGCC TCGACGAGGG GGCACCCACT
CACCTGACGG TGCCGAGCGG TTCGCGGATT ACCCTGGCGT ACGATGCGGA TGGGGCTCCG
ACCTTGGCGG TGAAGCTACA GGAAATGTTC GGGTGCGCCG ACACCCCTGC CGTGGCCTGG
GGGCGGGTCC CGGTGGTGGT CCACCTGCTG TCCCCCGCCG GGCGTCCCCT GCAGGTCACG
TCCGATCTGC GCGGTTTCTG GAACGGGGCG TATCAGGAGG TCAAGAAAGA GATGCGGGGA
CGCTACCCCA AGCATCCCTG GCCCGATGAT CCCTGGAGCG CGGTCCCGAC CCGCAGGACC
AAACGGGCGG GAGGAGGGTA A
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| Protein sequence | MNRLPVDDVI PDLLTALEQR NAAVLQAPPG AGKTTRVPLA LLDAPWLNGK RIIMLEPRRL
AATNAARWMA RSLGEEAGAT VGYAIRFDRR VSARTRVEVV TEGILTRRLQ SDPLLEGVGA
VIFDEFHERS IHSDLALALC RDVQAGLRED LRIIVMSATM AAAPVAALLG DAPVITSEGR
NYPVALRHIP PNDRENLPSA VARAVRIAVR ECEGDILAFL PGVGEIRRCG QLLADDPPLH
APLVVPLYGD LPFVEQERAI LPVPGRRKVV LATTIAETSL TIEGVRVVVD GGQTRRLRYD
PASGLNRLVT ERVSAASATQ RAGRAGRLGP GTCYRLWPEH DQQALLAADP PEILIADLAP
LALDLAHWGV SDPASLAWLD PPPRGALEEA RNLLKSLDAL DGQGMITETG RRMAELPLHP
RLAHMLLRAT ERGPAPLACD VAALLTERDI VRSAGTGQAA ERAGCDMLIR VEALEQWRQG
RGGRDHQVDS SACRAVDRVA SHLRRLIAPD GKGHAVADPV RETGLLLSWA YPDRIAQARP
GGERRYLLAN GRGALLSERS SLHGEQLLVA YLVERGERGD DLIRQASALD PARFHEEFSG
DIYRRRTVVW DDREGRVSAR DEACYGAIVL ESRPVSATGD EVRAALLAGL RAGPGITALG
WTPSACQFRA RVRFLGRVCP DEGWPDLSDE RLLKTIEVWL GPFLGKARSL ADLASIDLLT
PLKALLSWDQ LRRLDEGAPT HLTVPSGSRI TLAYDADGAP TLAVKLQEMF GCADTPAVAW
GRVPVVVHLL SPAGRPLQVT SDLRGFWNGA YQEVKKEMRG RYPKHPWPDD PWSAVPTRRT
KRAGGG
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