Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU1793 |
Symbol | tig |
ID | 2685787 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | - |
Start bp | 1958330 |
End bp | 1959625 |
Gene Length | 1296 bp |
Protein Length | 431 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637126476 |
Product | trigger factor |
Protein accession | NP_952843 |
Protein GI | 39996892 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0544] FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) |
TIGRFAM ID | [TIGR00115] trigger factor |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.25642 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCAGCA CTGTCGAGTC GCTCAGCAGC GTCAAAAAGA AAATTTCCTT TGAGATTCCG GCGGACCGCG TTACGTCCGA GATAGACAAG GTTTTTGAAA AGATCCGCAA GCGCGCGGCC ATTAAGGGCT TCCGTAAAGG CAAAGCCCCC CAGTCACTCA TTGAAAAGCA TTATGCAGAC GTCATGGAAG GTGACGTGCT GAAGAATCTG TTCGAGGAGA CGTATTTCAA GGCGCTTGCC GAGCACAAAA TCTTTCCCGT TTCCCATCCA GTAATTGACA GCGACGAAAT AAAGCGCGGA ACTCCGTTTA CCTACTCCGC TACGGTCGAA GTTCTCCCCG AAATCGACGT AAAGGACTAC AACGGACTTG AGGTTGCCAA GGAAACCTTC ACGCCCGATG AGTCGATTGT TGAGAAGAGA CTGCAGGAAA TGCGTGAGAA CATGTCTCAC CTGAGGTCTC TGGAAGAGGG ATCAGTGGCT GAAGATGGGC ACTTCGCCGT CATTGACTTT ACCGGTTACG TCGACGGTGT TCCGTTTGAA GGCGGCTCTG CCGAGAGTTA CCAGCTTGAA CTCGGTTCCG GCCGATTTAT TCCCGGTTTT GAAGAACAGA TCGTGGGTAT GAAGACCGGC GAGTCGAAAT CAATGTCGCT GAACTTTCCT GAGGACTACT GGAACAAAGA TCTTGCCGGC AAAGAGGCCC GATTTGACGT GATCCTGAGT GAGATCAAGG TCAAAGAGCT CCCTGAGCTG AATGATGAGT TTGCCGCTCA GATGGGAGAG TTCGATACCA TCACCCAACT GAGGGACAAG ATTGCTGAAC TGTACGAGAA GCAGGAAAAC GACCGGATTA AAGCAGACCT TCAGGATCGG GTCGTGCAGG CGCTCATTGA GAAAAACGAA ATAGAGGTTC CTTCGACGCT TGTGGACCGG CAACTGCAGA CCATGCTGGC CAACGCACAG AACAGGCTTG CCCAGCAGCG GCTTACCTTC GAAATGATGG GAATGAACGA GGAGTCGTTC AAGGCCCAGT ACCGTACCGT TGCTGAGAAC CAGGTCAAGG GTTCGCTTCT TCTTGAAGCC GTTGCCAAAA AAGAAGGAAT TTCGGTCGAA GAGGCTGACA TCGAGAAAAA ACTGCTGGAA ATTGCAGGAG GCAACGAGGA GGAGCTCGGC CGCGTAAAGA GCTTTTACGA GCAGAATCGT GCGGCACGGG AAAATCTTGT AGCGCACTTG GCCGAGGAGA AGGTCATGTC GTTTCTTCTG GGTAGCGCAG TAATCAGCGA GAAGACGAAA GAGTAA
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Protein sequence | MTSTVESLSS VKKKISFEIP ADRVTSEIDK VFEKIRKRAA IKGFRKGKAP QSLIEKHYAD VMEGDVLKNL FEETYFKALA EHKIFPVSHP VIDSDEIKRG TPFTYSATVE VLPEIDVKDY NGLEVAKETF TPDESIVEKR LQEMRENMSH LRSLEEGSVA EDGHFAVIDF TGYVDGVPFE GGSAESYQLE LGSGRFIPGF EEQIVGMKTG ESKSMSLNFP EDYWNKDLAG KEARFDVILS EIKVKELPEL NDEFAAQMGE FDTITQLRDK IAELYEKQEN DRIKADLQDR VVQALIEKNE IEVPSTLVDR QLQTMLANAQ NRLAQQRLTF EMMGMNEESF KAQYRTVAEN QVKGSLLLEA VAKKEGISVE EADIEKKLLE IAGGNEEELG RVKSFYEQNR AARENLVAHL AEEKVMSFLL GSAVISEKTK E
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