Gene GSU1791 details

Gene Information

• Locus tag: GSU1791
• Symbol: clpX
• ID: 2686411
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter sulfurreducens PCA
• Kingdom: Bacteria
• Replicon accession: NC_002939
• Strand: -
• Start bp: 1956459
• End bp: 1957712
• Gene Length: 1254 bp
• Protein Length: 417 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 637126474
• Product: ATP-dependent protease ATP-binding subunit ClpX
• Protein accession: NP_952841
• Protein GI: 39996890
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG1219] ATP-dependent protease Clp, ATPase subunit
• TIGRFAM ID: [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX)

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.747012
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAGTAGGA GAAACGACGG CAGCGACAAT CTCACCTGCT CCTTTTGTGG TAAGAGCCAG 
GATGAAGTAA AAAAGCTCAT TGCCGGACCA ACGGTATATA TTTGCGACGA GTGCATCGAA 
CTCTGTAATG ATATTATTGC CGAGGAGTCG AAGCTTGAAG AGGCCATGGG GCCCGATGTC 
AAGAAGCTTC CCAAACCCCG TGAAATCAAG GATGTTCTCG ACGAATACGT GATTGGCCAG 
GACCAAGCGA AAAAAGTCCT CGCCGTCGCT GTTTACAATC ACTACAAGCG CATAGAGTCC 
ATGGGCAAGC CGAGCGATGT AGAGATGCAG AAGAGCAACA TTCTTCTGCT TGGACCTACT 
GGCTCCGGCA AGACCCTGTT GGCTCAGACC CTGGCCCGGA TACTGAAAGT TCCGTTCGCC 
ATGGCGGATG CTACAAACCT CACTGAAGCC GGCTATGTGG GGGAAGATGT CGAGAATATC 
ATTCTCAATC TTCTTCAGGC TGCCGACTAT GATGTAGAAC GGGCCCAGAA GGGTATCATC 
TATATCGACG AAATTGACAA GATAGCCCGT AAATCCGATT CTCCATCCAT CACCCGGGAT 
GTGTCGGGGG AAGGGGTGCA GCAGGCGCTG TTGAAAATTA TTGAAGGAAC CGTCGCCAGC 
GTTCCTCCCA AGGGAGGACG CAAGCACCCG CAGCAAGAGT TTTTGAAGGT CGATACCACG 
AATATTCTGT TTATCTGCGG CGGCGCGTTC GCGGGGCTCG ACAGCATTAT TCAGCAGCGT 
ATCGGTGTGA AAAAGCTCGG TTTCGGTGCT GACGTAAAGA GCAAAGTCGA GAAGAGAGCA 
GGAGAGCTTC TCACGGAAGT TACCCCTGAA GACCTTCTCA AGTTCGGTTT CATCCCAGAA 
TTCATCGGTC GTCTGCCCGT CCTCGCTACC CTGCGCGAAC TGGATGAAAC CGCTATGGTC 
CAGATCCTGA AGGAGCCGAA AAACGCGCTT ATCAAGCAAT ACCAGAAGCT GTTCGAAATG 
GAGCATGTGA AGCTCAAGTT TACCGACGGT TCTCTGGTCG CCATATCCCG GGAAGCGCTC 
AAGCGTAAGA CGGGCGCCCG CGGACTCCGG TCGATCCTTG AGAACGCCAT GCTTGACATC 
ATGTATGAAA TTCCATCGCA AACCATGGTT AAAGAAGTGG TCATCAACGA AGATGTCATC 
TACAACAAGG AAAAGCCGAT CATTGTTTAT GAAAATGTGG CTGAGTCAGC CTGA 

 

Protein sequence

MSRRNDGSDN LTCSFCGKSQ DEVKKLIAGP TVYICDECIE LCNDIIAEES KLEEAMGPDV 
KKLPKPREIK DVLDEYVIGQ DQAKKVLAVA VYNHYKRIES MGKPSDVEMQ KSNILLLGPT 
GSGKTLLAQT LARILKVPFA MADATNLTEA GYVGEDVENI ILNLLQAADY DVERAQKGII 
YIDEIDKIAR KSDSPSITRD VSGEGVQQAL LKIIEGTVAS VPPKGGRKHP QQEFLKVDTT 
NILFICGGAF AGLDSIIQQR IGVKKLGFGA DVKSKVEKRA GELLTEVTPE DLLKFGFIPE 
FIGRLPVLAT LRELDETAMV QILKEPKNAL IKQYQKLFEM EHVKLKFTDG SLVAISREAL 
KRKTGARGLR SILENAMLDI MYEIPSQTMV KEVVINEDVI YNKEKPIIVY ENVAESA