| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU1708 |
|---|
| Symbol | |
|---|
| ID | 2685571 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sulfurreducens PCA |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002939 |
|---|
| Strand | + |
|---|
| Start bp | 1872319 |
|---|
| End bp | 1873581 |
|---|
| Gene Length | 1263 bp |
|---|
| Protein Length | 420 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637126389 |
|---|
| Product | Atz/Trz family chlorohydrolase |
|---|
| Protein accession | NP_952759 |
|---|
| Protein GI | 39996808 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0266273 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGCTCT ACGCCGCCTC ATACCTTGTT CCCATTTCAT CGCCCCCTGT CGCCGGCGGC
GCACTAGCCG TCGACAATGG CCGGATAGTC GATACGGGTA CGTTTGCCGA GCTTCGTGCC
CGGTACGGCT GTCCCGTTCA CGACTTTCCG GGCTGCACCA TTCTTCCCGG CCTCGTCAAC
GCCCACACGC ACCTGGAGCT TACCCATTTC CCGTCATGGA AAATCCGCAA GGGAATCGAT
TACTCACCCC GGACGTACGT TGATTGGATC ATCCAGGTAA TAAAGATCCG CCGGGCCCTG
ACGCGGCAGG AACAGGAACT TTCCGTACGG GAAGGGCTGC GCATCTGCCT TGAAGCGGGG
ACCACGTCCA TCGGCGAAAT TCTCACCGAC CGGTCGCTCC TCCCTCTGTA TGCCGATTCC
GGCCTGGGGG GGCGGCTTTT TCTCGAGGCC ATAGGCCACG ACCCGGTCCG CAGCGCCGAG
CTCATCTCGG AGCTTGGTGC CGCCGTAGCT TCTTTCCCTG CTGGAGACTT ACTGCCGGGC
CTCTCGCCCC ATGCCCCCCA CACTGTTTCT GAGCAGCTCC ATCAGAATGT TCGCCGGCTG
GCGGAAGAGT ACAACGTGCC GCGAATCATC CATCTGGCCG AATCCCGGGA AGAGAGTGAT
TTCTTCTTCG ATTCGACCGG AAAAATTGCT GAGCTTCTCT ATTCCCACGT CAGGTGGGAG
TCGTACCTTC CCGCCCCGAG ACGTGCTACC GCAACCGCCT GGCTTGACGG ACTCGGCGTC
CTCAACGGTG CCATCTCGGC GGTCCACTGC GTTCATCTTA CGCCGTCGGA TGCCGAAACC
CTGGCCAAAC GCGGAGTCGG CATTGTGCTT TGCCCCCGGA GCAACGAAAA GCTTGCTGTG
GGGCGCGCAC CTGTCGCCTA TTTGAAGAAA CTTGGTATTC CCCTTGCCTT GGGCACCGAC
TCGCTGGCCA GCAACGATTC CCTCTCACTC TGGGATGAAA TGCGTTACCT CCTCGATCTC
TTCCCGGGCG TCTTCACCCC GTCAGAGGCC CTTGCCATGG CAACCATCGG TTCGGCACGA
CAGCTCGCTC TCGCCGATCG GGTAGGGTCC ATCGAGAAGG GCAAACGCGC CGATCTGCTT
GTCATGAAAC TACCTGGTCC GCAGAGCACC GGCGAAGGAC TCCACGAAGC CGTTATCGGC
AGCGGAGAAC TTCTCCATGT GATTCTGTCC GGCAGGTTCA CCGACCGGAC AGAACCCCGC
TAA
|
|---|
| Protein sequence | MELYAASYLV PISSPPVAGG ALAVDNGRIV DTGTFAELRA RYGCPVHDFP GCTILPGLVN
AHTHLELTHF PSWKIRKGID YSPRTYVDWI IQVIKIRRAL TRQEQELSVR EGLRICLEAG
TTSIGEILTD RSLLPLYADS GLGGRLFLEA IGHDPVRSAE LISELGAAVA SFPAGDLLPG
LSPHAPHTVS EQLHQNVRRL AEEYNVPRII HLAESREESD FFFDSTGKIA ELLYSHVRWE
SYLPAPRRAT ATAWLDGLGV LNGAISAVHC VHLTPSDAET LAKRGVGIVL CPRSNEKLAV
GRAPVAYLKK LGIPLALGTD SLASNDSLSL WDEMRYLLDL FPGVFTPSEA LAMATIGSAR
QLALADRVGS IEKGKRADLL VMKLPGPQST GEGLHEAVIG SGELLHVILS GRFTDRTEPR
|
|---|
| |