Gene GSU1617 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGSU1617 
SymbollexA-2 
ID2685264 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sulfurreducens PCA 
KingdomBacteria 
Replicon accessionNC_002939 
Strand
Start bp1770881 
End bp1771492 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content57% 
IMG OID637126297 
ProductLexA repressor 
Protein accessionNP_952668 
Protein GI39996717 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) 
TIGRFAM ID[TIGR00498] SOS regulatory protein LexA 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAACAC TTACCTCTCG CCAGCGCACG GTGCTTGAGT TCATAACCGC CCACGTGGAT 
CGCCACGGCT ATCCTCCTAC CATGCGGGAA ATAGCCCGCC ACCTGAACGT GAACGGCACA
CTGGGCGTTG CAAAACACCT TGAGGCTCTT GCCCGGAAAG GCTATCTCCA GCGGGAACCG
GGGAACTCGC GCGGCATAAC TCTGACTGGG CAGACACGGC ACACCCCTAC CGTTTCGTTA
CCCGTGATCG GAGTCGTGCG GGCCGGGGTT CCCCAGATCG CCACAGAGGA AATCGAGGAG
CACATATCGA TTGATCAATC CCTGGTCAAA GGAGGTGCCT TTTTTCTCAG AGTCAAGGGT
GACTCCATGA TCAACGCCGC GATCATCGAA GGGGACCTGG CCCTGGTCCG CCCCCAGCAA
ACAGCGGAAA ACCGCGACAT CGTGGTAGCC ATGATCGACG GCGAAGCAAC ACTCAAACGT
TTCTACCAAG GAGCGGACCA TATCCGGCTT CAGCCCGAAA ATCCCAATAT GGCCCCCATC
ATAGTTCGGA GCGGGGTACA GGAGGCATGG ATAATCGGCA AAGTTGTGGG TATTTACCGG
CGTATGGATT AA
 
Protein sequence
METLTSRQRT VLEFITAHVD RHGYPPTMRE IARHLNVNGT LGVAKHLEAL ARKGYLQREP 
GNSRGITLTG QTRHTPTVSL PVIGVVRAGV PQIATEEIEE HISIDQSLVK GGAFFLRVKG
DSMINAAIIE GDLALVRPQQ TAENRDIVVA MIDGEATLKR FYQGADHIRL QPENPNMAPI
IVRSGVQEAW IIGKVVGIYR RMD