| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU1611 |
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| Symbol | |
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| ID | 2687411 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sulfurreducens PCA |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002939 |
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| Strand | + |
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| Start bp | 1762910 |
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| End bp | 1766008 |
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| Gene Length | 3099 bp |
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| Protein Length | 1032 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637126291 |
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| Product | AcrB/AcrD/AcrF family protein |
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| Protein accession | NP_952662 |
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| Protein GI | 39996711 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.651571 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACATTG CCGAAATCTT CATCCGCCGG CCGGTCATGA CGAGTCTCAT CATGCTGGCG
GTTATGCTTT TCGGCCTCAT CGCCTACGAC AAGCTGCCGG TCAATGACCT GCCCACCGTC
GACTATCCGA CCATCCAGGT TTCCGCCACT CTGCCGGGCG CCAACCCCGA CACCATGGCC
TCATCGGTGG CACTTCCCCT GGAGCGCGAG TTCTCCACCA TTGCCGGTGT CGACTCTATG
ACCTCCACCA ACGGCATCGG CATATCCCGC ATTACCATCA AGTTCACCCT GGAGCGGGAC
ATCGATGCCG CGGCCCAAGA TGTCCAGGCC GCCATTTCAA GGGCCCAGCG CCAGCTTCCT
CAGGACATGC CGGCCCCTCC ATCGTTCCAG AAGGTGAATC CGGCTGATCA GCCGATCCTC
TATCTGGTCC TCAGTTCGCC GACGCTTCCC CTCTCCACGG TCCACGAATA CGCCGATACC
ATGATCGCCC AGCGGATTTC CATGGTCAAC GGCGTAGCCT CGGTACAGAT CTACGGCTCC
CAGAAATATG CGGTACGGGT TCAGGTGGAC CCCAAGGCCC TGGCGGCCCG CAAAATCGGC
ATTGACGAGG TGGCCCAGGC CCTGGAGCGG GGGAACGTGA ACCTTCCCAC CGGCACCCTC
CAGGGAAAGC ACGAGGCCCT GACGATCCAG ACCAGTGGCC AGCTTTACAG CGCAAAGGAG
TATGAGCCGC TCATCGTCGC CTATCGCAAC GGTTCACCGG TCCGTCTCGG AGAGATCGGC
CGGGTTATTG ACAGCGTGGA GAACGACAAG GTGGCCGGCT GGTACAAACA GACCCGTGCC
ATTGTCCTCG CCATCCAACG CCAGCCAGGC ACCAATACCA TCGAAGTGGT AAACAGGATT
AAGGAGCTGC TTCCCCAGTT CCGCTCCCAA CTCCCCGGCT CGGTGGACCT GAGTATCCAC
TTTGACCGGA CCGAGGGGAT CAAGGAGTCG GTCGCCGATG TGAAGTTCAC TATGGTGCTC
ACCATCTGCC TGGTTATCAT GGTGATCTTT CTCTTCCTGC GCAACCTGCC GGCAACGGTA
ATTCCGAGCC TGGCGCTACC GCTCTCCATT GTCGGTGCTT TTTCGGCCAT GTACCTGATG
GGGTTTTCGG TCAATAACAT CTCACTGTTG GCTCTGACCC TGTCGGTGGG CTTCGTGGTG
GACGACGCCA TTGTCATGCT GGAGAACATC GTCCGTCACC TGGAGAAGGG GGAGAGCCCC
ATGGAGGCGT CCCTCCGCGG CTCCCGCGAG ATCGGATTCA CCATTGTCTC CATGACCATT
TCATTGGTGG CGGTCTTTAT CCCGGTTCTT TTCATGAAAG GGATGCTCGG CCGGCTGCTC
CACGAATTCG CCGTCACCAT CAGCCTGGCC ATTCTCATTT CCGGCTTCGT ATCGCTCTCG
CTGACACCCA TGCTATGCAG CCGCTTCCTT CGTCCGCACA GTGGCGAAAA GGGCCACGGC
AGGTTTTATA CGGTCATGGA GCGGTTTTTC GACGGCATGT ACCGCCTCTA TGAAGTGACT
CTGGCAAAGG TTCTGAGGCT CCGCCGGACC GTGTTGGCCG GCACCCTTGC CATGACCCTG
CTCACCATCT GGCTCTTCAC GAGAATCCCC ACAGGGCTGC TGCCCAGCGA CGACATCGGG
GCCATCTTCG CTATTACCGA GGGTGCCCAG GGGATTTCCT TCGAGGAAAT GAAGGCCAAG
CAGCAGCAGT TGGCGGCCAT TGTGCTCCAG GACCCGAACG TTGAAGGATT CATGTCTTCG
GCGGGCGCCG CCGGGAGCCG GGTGTCCTCC AATTCGGGGT TCATGTTCAT TCGGCTCAAG
CCCCGCCACG AGCGGAAGCT TAACGCGGAT CAGGTCATCC AGCAGCTCCG GCCGAAAGTC
ATGGCTGTGC CCGGGATTCT CATGTTCCTC CAGAATCCGC CGCCGATTCG ACTGGAGGCT
CAGTTGGCCA AGAGCCAGTA TCAGTTCGTG CTCCAGAGTC CCGATACGGA TGAACTCTAC
CGGCGCGCAG CCGACCTGGA GGCCAGATTG AAGCAGGTGC CGCTCCTGCT GGACGTGACC
AGCGACCTCC AGCTCAATAA TCCCCAGGTG CAACTCGACA TAGACCGGGA CAAGGCGTCG
GCCCTCGGCA TCACCGCCCA CCAGGTGGAG GATGCCCTCT ATTACGCCTA CGGCTCCCGC
CAGGTTTCCA CCATCTTTGC TCCAAACAAC CAGTTCAAGG TTATCCTGGA ACTGGAGCCC
CGCTACCAGA CCGACCCGGC AGCCCTGTCC ATGCTTTACA TCCGTTCCCA GCAGGGCGAC
CTTGTTCCTC TCAACACCCT CGCCACCCTG CGGCGGACCC TCGGTCCCCT TTCCGTGAAC
CATCTGGGGC AGATCCCGGC GGTGACCATC TCCTTTAACC TGCGACCGGA CACCCCTCTC
AGCGAGGCCG TGTCAGCCAT CGAGCAGGTG AGCCGCGATA CGCTTCCAGC TTCATTCACC
ACCAGTTTCC AGGGAGTTGC CCAGGCCTAC CAGCAGTCGA CCACGGGGCT AATTGTCCTG
ATCATCATGG CGATCGTGGT AATCTACATT GTCCTCGGTA TTCTTTATGA GAGCTACATC
CATCCCCTCA CCATCCTGTC GGGTCTTCCG TCAGCCGGGT TCGGGGCACT CATTACCCTG
ATGATCTTCG GCAAGGAACT GAATCTCTAC GGCTTTGTCG GTCTCATCAT GCTGATTGGC
ATTGTTAAGA AAAACGCGAT CATGATGATC GACTTCGCCC TGGAGGCCCA GCGCACCGAA
GGGAAACCGC CGCTGGAGGC AATCCACCAG GGGGCTCTCG TCCGTTTCCG CCCCATTATG
ATGACCACCA TGGCGGCGCT GATGGGGACA CTCCCCATTG CGCTGGGGAT CGGTGCCGGG
GCCGAGGCCA GGCGCACTCT GGGGCTGGCA GTGGTGGGGG GGCTTCTGGT GTCCCAGTTG
CTGACCCTTT ACATAACACC GGTTATTTAT TACTACATGG ACCGCATGCA GGGATGGTTC
GTCGGGAAAC TGCCGGGCCG CCGGAGGGTC AGCGCATGA
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| Protein sequence | MNIAEIFIRR PVMTSLIMLA VMLFGLIAYD KLPVNDLPTV DYPTIQVSAT LPGANPDTMA
SSVALPLERE FSTIAGVDSM TSTNGIGISR ITIKFTLERD IDAAAQDVQA AISRAQRQLP
QDMPAPPSFQ KVNPADQPIL YLVLSSPTLP LSTVHEYADT MIAQRISMVN GVASVQIYGS
QKYAVRVQVD PKALAARKIG IDEVAQALER GNVNLPTGTL QGKHEALTIQ TSGQLYSAKE
YEPLIVAYRN GSPVRLGEIG RVIDSVENDK VAGWYKQTRA IVLAIQRQPG TNTIEVVNRI
KELLPQFRSQ LPGSVDLSIH FDRTEGIKES VADVKFTMVL TICLVIMVIF LFLRNLPATV
IPSLALPLSI VGAFSAMYLM GFSVNNISLL ALTLSVGFVV DDAIVMLENI VRHLEKGESP
MEASLRGSRE IGFTIVSMTI SLVAVFIPVL FMKGMLGRLL HEFAVTISLA ILISGFVSLS
LTPMLCSRFL RPHSGEKGHG RFYTVMERFF DGMYRLYEVT LAKVLRLRRT VLAGTLAMTL
LTIWLFTRIP TGLLPSDDIG AIFAITEGAQ GISFEEMKAK QQQLAAIVLQ DPNVEGFMSS
AGAAGSRVSS NSGFMFIRLK PRHERKLNAD QVIQQLRPKV MAVPGILMFL QNPPPIRLEA
QLAKSQYQFV LQSPDTDELY RRAADLEARL KQVPLLLDVT SDLQLNNPQV QLDIDRDKAS
ALGITAHQVE DALYYAYGSR QVSTIFAPNN QFKVILELEP RYQTDPAALS MLYIRSQQGD
LVPLNTLATL RRTLGPLSVN HLGQIPAVTI SFNLRPDTPL SEAVSAIEQV SRDTLPASFT
TSFQGVAQAY QQSTTGLIVL IIMAIVVIYI VLGILYESYI HPLTILSGLP SAGFGALITL
MIFGKELNLY GFVGLIMLIG IVKKNAIMMI DFALEAQRTE GKPPLEAIHQ GALVRFRPIM
MTTMAALMGT LPIALGIGAG AEARRTLGLA VVGGLLVSQL LTLYITPVIY YYMDRMQGWF
VGKLPGRRRV SA
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