| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU1594 |
|---|
| Symbol | |
|---|
| ID | 2687352 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sulfurreducens PCA |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002939 |
|---|
| Strand | + |
|---|
| Start bp | 1748190 |
|---|
| End bp | 1749446 |
|---|
| Gene Length | 1257 bp |
|---|
| Protein Length | 418 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 637126274 |
|---|
| Product | M16 family peptidase |
|---|
| Protein accession | NP_952645 |
|---|
| Protein GI | 39996694 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0612] Predicted Zn-dependent peptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.326709 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTCAATA AAACAATCCT CGACAATGGC GTGCGGATCA TCTCTGAGTA CATGCCCCAC
GTCCATTCTG TCTCCATTGG TATCTGGGTG GCCAACGGCT CCCGCCATGA ACGGCGGGAG
CACAATGGCG TCGCTCACTT TGTCGAGCAC CTGATGTTCA AGGGAACTGA ACGGCGCAAC
GCCCTCGATA TCGCACGCGA AATCGATTCG GTAGGCGGCG TGCTTAATGC ATTCACGAGC
CGCGAGTACG TCTGTTATTA CGCCAAGGTC CTCGACAAAT TCCTTCCCAA AACCATTGAT
CTTCTTGCCG ACATCTTTCT CAATTCAATC TTTGACTCCG AAGAGATTGA GAAGGAGCGG
AAGGTGGTTC TCCAGGAAAT CAACATGCTG GAGGATACAC CGGATGATTA CGTCCACGAT
CTGTTCCACC GAAGCTTCTG GCGGGGGCAT CCCCTCGGCA TGTCGATTCT CGGCAGCGTA
GAGAGCATCG AAGGACTTTC CCGGGAAGCG ATCATTACTC ACCTGAAAGA GAAATACCGC
TCCGACGACA TTATCATTGC CGTGGCCGGC AACGTACGCC ACGACGAACT CCTGAGCCTG
GTGGATGGTC TTTTCGGGCG GGTGCCCGAG GGCTCTGGCC GGGATATCTG CCATCTGCCT
GCCTACGAAA AACAGGTCGA AGTGGTGGAG AAGGATTTGG AGCAGGTTCA CATCTGTCTC
GGCACCAAGG CCTTCCCTCA GAATCATCCT CGACGATTCG AAGTCTACCT GGTCAATACG
CTCCTCGGCG GCAGCATGAG CTCCCGGTTG TTCCAGGAGA TCCGTGAACG GCTGGGGCTT
GCCTATTCGG TCTATTCGTA CGTGGTTTCC CACACTGATG CAGGCTCACT GGTTGTCTAT
GTCGGAACAA GTCCGGAAAA ACTCGATGAC GTGCTCGATA TTACTGTTGC AGAGCTGAAG
CGTCTGAAGA CGGAACTTGT ACCGCTCCCC GAGTTGGAGT CGGCCAAGGA ACAGATAAAA
GGCAGCATTT ATCTTTCGTT GGAAAGCTCT GACAACAGAA TGACCAAACT CGCGAAAAAC
GAAATTTATT TTGGACGTTA CATCCCCATC CATGAGTTGG CGGATGGATT CGACTCCGTG
ACGAGTCGAG GAATTCTCGA ACTTGCCGGC GAGATTTTCG ACGAGCGCTA TCTGACCCTC
GCCCTCATGG GCAAGATTGA CAGTGCTGCG TTTGATGTTT CGCGGCTTGC GCTCTAG
|
|---|
| Protein sequence | MVNKTILDNG VRIISEYMPH VHSVSIGIWV ANGSRHERRE HNGVAHFVEH LMFKGTERRN
ALDIAREIDS VGGVLNAFTS REYVCYYAKV LDKFLPKTID LLADIFLNSI FDSEEIEKER
KVVLQEINML EDTPDDYVHD LFHRSFWRGH PLGMSILGSV ESIEGLSREA IITHLKEKYR
SDDIIIAVAG NVRHDELLSL VDGLFGRVPE GSGRDICHLP AYEKQVEVVE KDLEQVHICL
GTKAFPQNHP RRFEVYLVNT LLGGSMSSRL FQEIRERLGL AYSVYSYVVS HTDAGSLVVY
VGTSPEKLDD VLDITVAELK RLKTELVPLP ELESAKEQIK GSIYLSLESS DNRMTKLAKN
EIYFGRYIPI HELADGFDSV TSRGILELAG EIFDERYLTL ALMGKIDSAA FDVSRLAL
|
|---|
| |