| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU1525 |
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| Symbol | |
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| ID | 2687268 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sulfurreducens PCA |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002939 |
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| Strand | + |
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| Start bp | 1671264 |
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| End bp | 1672250 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637126203 |
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| Product | sigma-70 family RNA polymerase sigma factor |
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| Protein accession | NP_952576 |
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| Protein GI | 39996625 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00220664 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGACA TGAACGAACT GGATGAGAAA GAGCTGGATG CTCCGGATGA GCCCGGCGAG
GACTTCATTG AGCCCGAGCC GACGACCTTT GAGCTGGAGG CGGCCGAGGA AGAGGAAGAG
CCCGAGGAGC CCGCTGAGGT CGGCAAGAAC ATAGAGCAGG AGCACTTCGA CGATGCAATC
AAGCTCTATT TGCGCGAGAT TCAGCGGACG CGGCTGCTGA CCGCCGATGA GGAAAAAGAG
CTGGCCGGCC GTATCGCCAA GGGTGACAAG GCTGCCCGGG ATAAGATGAT CGAGTCGAAT
CTGCGGCTCG TGGTCAAGAT TGCCAAGCGG TACATCAATC GGGGGCTCCC TTTTCTCGAT
CTGATCGAGG AGGGCAACAT GGGGCTCATC AAGGCGGTGG AGCGCTTCAA GCTCTCGAAG
GAGTGCCGTT TCTCCACCTA CGCCACCTGG TGGATCCGCC AATCCATCGA GCGCGCCCTC
GTGAATCAGT CGCGGACGAT CAGACTGCCG GTCCATGTCT CCGACGACAT TAACAAGATG
CTTAAGATCA CGCGTGAACT GGTGCAGAGA CTCAACCGCG AGCCGAGCGT GAAAGAAGTC
GCCACCGAGA TGAAGGTGAA TTCCGCCTAC GTCCGGCGGC TGATGGTCCT CCTCAAAAAG
ACCTACTCCA TCGAGCGCCC CATGGGGGAG AACAGCGATT ATTTTCTTAT CGACACCATT
GAGGATACGT CCACCGTCTC GCCGGCCGTG CTGCTTGAGG ATCTCAACAA ATACGAAATC
GTGTCCAAGT GGTTTGCGTC CCTGTCTGAG AACGAGCAGA CGATCCTCAC GCTCCGCTTT
GGCCTGGAGG ACAAGGAGCC CCAGACCCTC GACACCATCG GTCGCAGCTT CGGCGTCACC
CGTGAGCGTA TCCGGCAGAT CGAGGCCAAG TCTCTGGAAA AATTGAGAAA GTATATTGAG
GAAAGCGATG GCAACGCCAT CGATTGA
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| Protein sequence | MSDMNELDEK ELDAPDEPGE DFIEPEPTTF ELEAAEEEEE PEEPAEVGKN IEQEHFDDAI
KLYLREIQRT RLLTADEEKE LAGRIAKGDK AARDKMIESN LRLVVKIAKR YINRGLPFLD
LIEEGNMGLI KAVERFKLSK ECRFSTYATW WIRQSIERAL VNQSRTIRLP VHVSDDINKM
LKITRELVQR LNREPSVKEV ATEMKVNSAY VRRLMVLLKK TYSIERPMGE NSDYFLIDTI
EDTSTVSPAV LLEDLNKYEI VSKWFASLSE NEQTILTLRF GLEDKEPQTL DTIGRSFGVT
RERIRQIEAK SLEKLRKYIE ESDGNAID
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