Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU1494 |
Symbol | |
ID | 2686129 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | + |
Start bp | 1639032 |
End bp | 1640684 |
Gene Length | 1653 bp |
Protein Length | 550 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637126170 |
Product | sensory box histidine kinase |
Protein accession | NP_952545 |
Protein GI | 39996594 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3852] Signal transduction histidine kinase, nitrogen specific |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.102326 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGGAAA GCCGGCGCGT TGTCTGGTTC ATCCTTGCCC GGATGATTGT GGTGTCACTG TTTCTGGTGT CCACCATCAT CCTGAGAATG AAGGGGACCG GCCCCTTGGG TGTGCATGCC CTCGAGGGGA TAACGAAGAT CGTAGTGGCC ACCTACGGCT TCTCGATAGT GTCCCTTCTT TTCCTCAGGG TTACCGCGCG CTACGATCAG ACCGTTACCT ATTTCCAGAT CATCTGGGAC ATCCTCTTCG TGACACTGCT GATCCTTTTT ACCGGCGGCG TCACGAGCCC CTTTTCCTTC CTGTATCTGC TCGCCATAAC CAGCGCCAGC GTGCTGCTCG CCCGTCGGGA AGCCCTCTAT ACGGCATCCC TCTGCGCCAT CATTTATGGC GCCATTATGG ATTTGCAGTA TTTCGGCAGG CTGGTTGACC TGGGGCTCAG TCCCGTGCCG GCGCAGAAGC TGGGCACCAC GTACATCTTT TATACGATTT TTCTCAATAT CATCGCCTTT TGCTCCACCG CGCTCCTCAC CGGCTACCTG GCGGAACGGG CGCGTCGCAG CGAAACCGAG CTTGAACAGA AGGCCATCGA CTATGACGAG CTCGAACGTC TCAACAGCAC TATCGTCTCG AATCTGAACA GCGGACTCAT TACCGTCACG GGCGATGGGA GGATCCGGGT CTTCAACCGG TACGCCGAGG CCCTTACCGG TATCGGCCTT GCCGAGGCCT ATGACTGCCA CCTGTTCGAC GTGTTGCCGG GATTCCGTGT CTACGCGGAT GTGCTTGCCA ACGTCAAAAG AGGTGAGTTC GAGTTCATTG CCAAGATGGG AAGGAAGCTT ACCATCGGCT TCAGCAGCGT GCCGCTCATG TTGAAAGACA GCGACGCAGC CGGTATCCTG CTCAATTTCC AGGATGTAAC CCAGGTCAGG AGGATGGAGG AAAGCCTCAA GAAGTCTGAC CGGTTGGCAG CCATTGGCGA GCTTTCCGCC CGGATTGCCC ACGAGATCCG CAACCCTCTG GCCGCCATCA GCGGGTCGAC CCAGCTCATT GCCCAGGGGG GAGCCGTGTC CGACCCCGAC CGGCGCCTCT TCGACATCGT CCTGAGGGAA ACGGACCGGC TCAACGGCCT GATCAGCGAT TTTCTCGCCT ATGCCCGCCC CAACCAGCCC GAGCCGCGGC CGGTTGATTT CCATTCACTC GTGGCGGAAC TGGCAGCGCT CGTCACGTCC GACGAGCGGT TCGAGGGTGT TGTGATCGAC AACCGGGTCG ACAGTACGTT CAGGCCGTTG CTGGACCCGG ATCAGTTTCG CCAGGTTCTC TGGAACCTGA TGGGCAATGC CGCAGGGGCC ATGCCCGATG GCGGGACTAT CACGGTGGAG GCTGGCCAAT CCGACGAGAT TCGCGGCGGC GGGCAGCGGC GCATCACCTA TCGTATTTCG GTTGCCGACA CCGGCCTCGG CATGGACGAA GCCACCGTAG CCCGTATTTT CGAACCGTTT TTCACCACCA AGTCCACTGG TACCGGCCTC GGTCTCGCAA CCGTCCACCG GATTGTGGAG GCCCACGGCG GCAGGATTGC CGTTGAAAGT ACGCCGGGTA AAGGCACTAT GTTCGTCATC TTTCTGCCGA CTCCCCCATC CAGCGGAGAG TAG
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Protein sequence | MKESRRVVWF ILARMIVVSL FLVSTIILRM KGTGPLGVHA LEGITKIVVA TYGFSIVSLL FLRVTARYDQ TVTYFQIIWD ILFVTLLILF TGGVTSPFSF LYLLAITSAS VLLARREALY TASLCAIIYG AIMDLQYFGR LVDLGLSPVP AQKLGTTYIF YTIFLNIIAF CSTALLTGYL AERARRSETE LEQKAIDYDE LERLNSTIVS NLNSGLITVT GDGRIRVFNR YAEALTGIGL AEAYDCHLFD VLPGFRVYAD VLANVKRGEF EFIAKMGRKL TIGFSSVPLM LKDSDAAGIL LNFQDVTQVR RMEESLKKSD RLAAIGELSA RIAHEIRNPL AAISGSTQLI AQGGAVSDPD RRLFDIVLRE TDRLNGLISD FLAYARPNQP EPRPVDFHSL VAELAALVTS DERFEGVVID NRVDSTFRPL LDPDQFRQVL WNLMGNAAGA MPDGGTITVE AGQSDEIRGG GQRRITYRIS VADTGLGMDE ATVARIFEPF FTTKSTGTGL GLATVHRIVE AHGGRIAVES TPGKGTMFVI FLPTPPSSGE
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