| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU1480 |
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| Symbol | |
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| ID | 2687760 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sulfurreducens PCA |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002939 |
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| Strand | - |
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| Start bp | 1619796 |
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| End bp | 1621349 |
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| Gene Length | 1554 bp |
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| Protein Length | 517 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637126156 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | NP_952531 |
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| Protein GI | 39996580 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.764278 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGAACCGG ACACGAAAAC CGTCAACAAG TGGCTCATCA CCATCACGGT GATGCTGCCG
ACAATCATGG AGATCGTCGA CACCTCCGTG GCGAACGTGG CGCTTCCCCA CATGCAGGGG
AGCCTCAACG CCGGCACCGA CGAAATCACC TGGGTGCTCA CCTCCTACCT GGTGAGCAAC
GCCGTGGTCC TCCCCATGAC CGGCTGGTTT TCGCGACTCT TCGGCAGGAA ACGGTTCCTC
ATCTCCTGCA TCACCCTCTT CACCATTGCC TCGTTTCTCT GCGGCGCCGC GCCCAACCTG
ACAAGCCTCA TCTTCTTCAG GATAGTCCAG GGCGCTGCTG GTGGAGCCCT GATCCCGAGC
AGCCAGGCGA TCCTCATGGA GACATTCCCG CCCCGGGAAC GGGGAATGGC CAACGCCATC
TTCGGCATCG GCGCCATGTT CGGCCCCATC ATCGGCCCGG CCCTGGGGGG CTGGATCACC
GACAACCTGA ACTGGCGCTG GATTTTCTAC ATCAATATCC CCATAGGCAT CCTGGCGGTG
ATCATGGCGG TCTACTTCAT CTTCGACCCC CCCTATCTCC GCCGCTCAAA GCTGTCCATC
GACTGGTGGG GGCTGGGGTT GCTGACCGTC GGACTCGGGG CGCTGCAGAT CGTGCTCGAC
AAGGGACAGC AGGACGACTG GTTCAACTCA TCCTTTATCA CCGGCGCATC CATCATCTCG
GTACTTGCGC TGATGCTTCT CATCTATGTG GAGCTCAGGC ACGAGCACCC CATCGTCAAC
CTGCGCCTGT TCAAGGACAT TTCCTTTTCC GCAGGCAATC TGATCATGTT CATGATCGGG
TTCTGCCTCT ACAGCTCGAT CATGCTGATC CCCCTCTTCC TCCAGACGCT CATGGGCTAC
GATGCAACCC TGGCGGGAAT GGTCCTGGCC CCAGGGGGGG TGGCCACCCT GCTGACCATG
CCGTTCGTGG GGGCGATCAT CTCACGCTAC GATGGCCGAA AAGTGGTCTT GGGAGGGCTT
CTGATTGGAG CGACCGCCAT GTTCCTCATG CAACGGTTCA CCCTGGAGGC ATCCTACTGG
GACTTCGTTT GGCCGCGCGT GGTCCTCGGC GTGGGGCTCG CCATGCTGTT CGTTCCCCTC
AATACCGTGA CCCTCATGCC GATTCCCAAG GAAGAGATGG GGAACGCCAC CGGCATGCTC
AACCTGATGC GCAATATCGG CGGCAGTGTG GGCATCGCCG TCGCGGCCAC TCTTATTGCC
CGGTATCACC AGTTTTACCA GAATGTCCTG GTGGAACAGG TAACGCCATA CAATCTTGCG
GCACAACAAC GGCTCAACGT GCTCGCGGAA GGGATGCAAC AGCGGGGAAT GGATGGGGTG
ACCGCAGGGA AAGCTGCGCT CGGAGCACTC TACGGTGTTA TTCAGAAACA GGCGGGGATG
CTGGCATACA ACCGGATATT CTGGATCGTG GGGATCGCCT TTCTCAGCGT GATCCCTTTT
CTGCTGCTTC TGCGACGCCC ACGTCACACG GGCGAATCCG CGGGGACGCA CTGA
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| Protein sequence | MEPDTKTVNK WLITITVMLP TIMEIVDTSV ANVALPHMQG SLNAGTDEIT WVLTSYLVSN
AVVLPMTGWF SRLFGRKRFL ISCITLFTIA SFLCGAAPNL TSLIFFRIVQ GAAGGALIPS
SQAILMETFP PRERGMANAI FGIGAMFGPI IGPALGGWIT DNLNWRWIFY INIPIGILAV
IMAVYFIFDP PYLRRSKLSI DWWGLGLLTV GLGALQIVLD KGQQDDWFNS SFITGASIIS
VLALMLLIYV ELRHEHPIVN LRLFKDISFS AGNLIMFMIG FCLYSSIMLI PLFLQTLMGY
DATLAGMVLA PGGVATLLTM PFVGAIISRY DGRKVVLGGL LIGATAMFLM QRFTLEASYW
DFVWPRVVLG VGLAMLFVPL NTVTLMPIPK EEMGNATGML NLMRNIGGSV GIAVAATLIA
RYHQFYQNVL VEQVTPYNLA AQQRLNVLAE GMQQRGMDGV TAGKAALGAL YGVIQKQAGM
LAYNRIFWIV GIAFLSVIPF LLLLRRPRHT GESAGTH
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