Gene GSU1464 details

Gene Information

• Locus tag: GSU1464
• ID: 2686198
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter sulfurreducens PCA
• Kingdom: Bacteria
• Replicon accession: NC_002939
• Strand: +
• Start bp: 1605546
• End bp: 1606235
• Gene Length: 690 bp
• Protein Length: 229 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 637126140
• Product: LysM domain-containing protein
• Protein accession: NP_952515
• Protein GI: 39996564
• COG category: [S] Function unknown
• COG ID: [COG1652] Uncharacterized protein containing LysM domain

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 0.026138
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGGTCC GTGCCGGCAT TTCCGCACTT GTGACCATTG CGGTTCTTGC GGGGTGCGCC 
TCACACCTGC CGGTCTACCG GATTGATGCT CTCGCCAGGC TTTCTGCTGT AAAGATGATG 
GGGGCGGAGA AGTATGCACC TCCGGAGTTG GCTAGTCTTC AACAGGCCAT TGTCGATGGG 
GACGCGCTCA TGCAGAGTGG TGAGCATGAG CTGGCCGACA GCTATTATCT GCTGGCCATT 
CGCAAAAGCG AGGCCGTGGA GCGGAGCATC GCCCGTGAGC GTGAACATGA ACGGGCGATG 
CAGGTGCGGA GCGAGAACGA GCGGCTTGCT CGTGAGCGCC AGAAGGCACT CGAAGAACTG 
AAACGCGAAC TTGCGGAAAA GGAAAAGGAA GAGAAAAAGC GAATCGAAAG AGCTCCTCAG 
CCTGTCCGTG ACAAGGAGAA AGAAAAAGAG GTCAGGTCGT TTCCGCTCCA CCATACGGTA 
AAGCGTGGCG AAAGCCTTCC GCAAATCGCC GCACAGCCTG ACGTTTACGG CGATGCAGCG 
CTCTGGCCTC TCTTGTACCG TGCCAACCGC GATCAGATAC GTGACCCTGG TAGAATATGG 
CCTGGACAGG TACTCAGAAT TCCTCGAAAT ATCTCACGTG ATGACCTCGC GGAGGCAAGG 
CGTTACGCGC AGGAGCGACC AGCGCCCTGA 

 

Protein sequence

MKVRAGISAL VTIAVLAGCA SHLPVYRIDA LARLSAVKMM GAEKYAPPEL ASLQQAIVDG 
DALMQSGEHE LADSYYLLAI RKSEAVERSI AREREHERAM QVRSENERLA RERQKALEEL 
KRELAEKEKE EKKRIERAPQ PVRDKEKEKE VRSFPLHHTV KRGESLPQIA AQPDVYGDAA 
LWPLLYRANR DQIRDPGRIW PGQVLRIPRN ISRDDLAEAR RYAQERPAP