Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU1429 |
Symbol | |
ID | 2686263 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | - |
Start bp | 1564814 |
End bp | 1567546 |
Gene Length | 2733 bp |
Protein Length | 910 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637126103 |
Product | hypothetical protein |
Protein accession | NP_952480 |
Protein GI | 39996529 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG0591] Na+/proline symporter |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGATCCTCA GCATCGAACT GGTGGTCGGC ATATCGCTGC TCTACATTGT CTTCCTCTTC ACGGTGGCGT ACTACGCCGA CAAGAAAAAG GAAGAGGGCC GGAGCGTTAT TGCCAATCCT CTGGTCTACG CCCTTTCCAT TGCCGTCTAT CACACGTCCT GGACGTTCTA CGGCAGCGTC GGCAAGGCCG CGACCACGGG AATCGACTTC CTGCTCGTCT ACCTGGGGCC CACGCTGGTC GCTTTTTCCT GGTGGTTTTT TCTGCGCAAG ATCGTGCGGA TCTGCAAGGA AAACAACATC ACGTCCATCG CCGACTTCAT CAGCTCCCGC TATGGGAAAT CCCAGTGGCT CGGCGCTGTG GTTACGGTCA TCGCCATCGT AGGGATCATG CCCTATATAG CACTCCAGCT CAAGGCGGTC TCAACCACCT TCGACATCAT CTGCGGCTAC CCTTACGTCC AACTCCCGCT TCTGCACACC AACTACCCGG TTTCGCTCCA CACCAACTTT TTTGCCGCGG TGATCCTGAG CGCCTTCAGC GTCATCTTCG GCGCCCGCAA GCTGGTTTCC ACCGAACGCC ACGAGGGACT GGTCGCCGCA ATTGCCGTAG AGTCCATCGT CAAGCTCGTG GCCTTCATGG CTGTGGGCAT CTACGTGACC TACGGAATGT TCAACGGTTT CGGCGACATC TTCGCCCGCA TCGATGCCCA GGGCCACCTG CTGGACAATC TGACCACCAT TGGGGGCTCC TCCACAACCT CCCACGCTCG CTGGTTCACG ACGCTCTACC TTTCCATGGG TGCCATCATG CTCCTCCCCC GCCAGTTCCA CGTAATGGTC ATCGAGAACT CGGACGAGGA GCATATCAAG AAGGCCATGT GGCTCTTCCC CGCCTACATG TTCCTGATAA ACCTCTTTGT GATGCCCATC GCGCTGGGGG GGATACTCCA GACCGGCGGC GTCCTGGGCG CCGACTTCTT CGTACTTACC CTTCCTCTCC AGACCGGCCA CTCCTGGCTG GCCCTCCTGG CCTTTCTGGG AGGTTTTTCG GCAACCGCAG GCATGATCAT CGTGGAGTCG GTCGCCATCT CCACCATGTT CCTCAACCAC CTCCTGATGC CCATCGTGGT GAAACTCAAG CCTCGCCCCT GGTTTCCCAC CATGCTCATC AACCTGAAGC GACTCTGCAT CTTTGTCGTG GTTTTTCTCG GCTATATCTA TCAGACCGTA GTTGGCGAAA CGTTCATGCT CGTGAACATG GGGCTCATTT CCTTCGCTGC CGCGGCACAG TTCGGCCCCG CTCTCCTGGG AGGACTCTAC TGGCGCAGGG GGAACAAATC CGGCGCCCTG ACCGGCATCG TCCTTGGCTT CATTTTCTGG TTCTATACCC TTCTCCTGCC GTCCATCATC ATATCCGGAT GGCTTCCCCG CGCAATTCTC GACCAGGGCC CCTTCGGCAT AACCCTGCTC AAGCCGACGG AGCTCTTCGG CCTCGCAGGG TTCGACATCT GGACCCATTC CCTCTTCTGG AGCCTCCTTT TCAATGTCGG GGGATACCTG ACCCTGTCCA TCGTCCTTCG CCAGAAGGAC CGGGAAAAAG AGCAGGTGCG AAAGTTCGTC GACGTATTCA CGGCACGGAA AAACGGCGTC CCCTGGGAAA CCAAGCGGAT GTCGAAGCCC GTGACCATCA TGCAGTTCGT TAATCTCATG TCAAAGTTCA TCGGCGACCA GCAGGCCCAC GCGGCAATCA CCGAGTACGT GGGCTCGCGC GAGATCGACG CCCAGGGAGG GGTCTCGGAG TTCGAGCTGC CCAAGCTGAA ACGGTTCACG GAAAAGACCC TCGCCGGCTC CGTGGGGGCA GCCGCAGCGG GGGCCATCGT GGAGAGCTAT CTGTCGGATC TCGGTTCGCG CATGGAACCG GTCTACGACA TATTCAGCAC CGTCCAGGCA TCCCTGGCCG AAAGCCGCGA AGCGCTCTAT GTACGACTCC GGGCCTCCGA GATCATGAAC CGGACCCTTG ACCTGCAGAT CATCATGGAT GATCTCCTCA ACCTGCTCTT GAAGGAGTTC AAGCTCGATC TTGCCGTCAT TCGGCTGGTG GACGAAAAGG GAGTGTTGCG GGTCAGAAGC TACAGCGGCA AGGGGATTGC CGGCATCGCC GGAAAAGATT GGGAGCCGGA GATCGAAACC TACATCGGCG AGGCGTTTCT GAGCAATCGG CTTCAGTTCG TGAACGACAC CCAGTACATG ACCAAGCCGC TTACCAGGGA ACTGATGCAG AAGGAAGGGA TCAAGTCCTT TGCCCACATT CCCATCTCCC GCAAAGGGGA ACCCCCCTTC GGGATCCTGT CCGTCTTCTC CAGAACCATC GTCGGCCTGT TCAACGAGCC CTTCCTGAAC CTTCTGGAGA GCCTTGCCGG CCAGTTGGCC CAGGCGGTAA AAATCGTCAC GGAAATGGAA GCGAAGGAGC GCGAGCGGGA AGAGAAGGAG CGCATCCTTC TAGAGAATGC GCGCGTAGTC AAGGAGATGG AAATCGCCAA GCAGATCCAG CTCTCGCTGC TCCCCTCGGC CCCGCCGACT CTCCCCCGGC ATGGCCGTGG CGGGCCGGTG CAAGCCGGCC ACCCACGTTG GAGGAGACTA TTACGACTAT TTCCAGCATG GCGAGTCCGG GGCGGACATG GTCATTGCCG ACGTCTCCGG TCACAGCGTC GGCGCAGCCC TCATCATGGC TGA
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Protein sequence | MILSIELVVG ISLLYIVFLF TVAYYADKKK EEGRSVIANP LVYALSIAVY HTSWTFYGSV GKAATTGIDF LLVYLGPTLV AFSWWFFLRK IVRICKENNI TSIADFISSR YGKSQWLGAV VTVIAIVGIM PYIALQLKAV STTFDIICGY PYVQLPLLHT NYPVSLHTNF FAAVILSAFS VIFGARKLVS TERHEGLVAA IAVESIVKLV AFMAVGIYVT YGMFNGFGDI FARIDAQGHL LDNLTTIGGS STTSHARWFT TLYLSMGAIM LLPRQFHVMV IENSDEEHIK KAMWLFPAYM FLINLFVMPI ALGGILQTGG VLGADFFVLT LPLQTGHSWL ALLAFLGGFS ATAGMIIVES VAISTMFLNH LLMPIVVKLK PRPWFPTMLI NLKRLCIFVV VFLGYIYQTV VGETFMLVNM GLISFAAAAQ FGPALLGGLY WRRGNKSGAL TGIVLGFIFW FYTLLLPSII ISGWLPRAIL DQGPFGITLL KPTELFGLAG FDIWTHSLFW SLLFNVGGYL TLSIVLRQKD REKEQVRKFV DVFTARKNGV PWETKRMSKP VTIMQFVNLM SKFIGDQQAH AAITEYVGSR EIDAQGGVSE FELPKLKRFT EKTLAGSVGA AAAGAIVESY LSDLGSRMEP VYDIFSTVQA SLAESREALY VRLRASEIMN RTLDLQIIMD DLLNLLLKEF KLDLAVIRLV DEKGVLRVRS YSGKGIAGIA GKDWEPEIET YIGEAFLSNR LQFVNDTQYM TKPLTRELMQ KEGIKSFAHI PISRKGEPPF GILSVFSRTI VGLFNEPFLN LLESLAGQLA QAVKIVTEME AKEREREEKE RILLENARVV KEMEIAKQIQ LSLLPSAPPT LPRHGRGGPV QAGHPRWRRL LRLFPAWRVR GGHGHCRRLR SQRRRSPHHG
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