| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU1401 |
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| Symbol | dnaE |
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| ID | 2687861 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sulfurreducens PCA |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002939 |
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| Strand | + |
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| Start bp | 1540372 |
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| End bp | 1543839 |
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| Gene Length | 3468 bp |
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| Protein Length | 1155 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637126075 |
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| Product | DNA polymerase III, alpha subunit |
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| Protein accession | NP_952453 |
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| Protein GI | 39996502 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.67909 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCTTTG TCCATCTCCA TCTCCATACC CAGTACTCCC TTCTCGACGG CGCCATCCGC
CTGGGCGACC TGGTGAAAAA GGTTAAGTCC CACGACATGC CCGCCGTGGC CATCACCGAC
CACGGCGCCA TGTTCGGGGC CATGGAATTC TACCTTAAGT GCAAGGACAA GGACGTGAAG
CCGGTCATCG GCGCGGAGGT CTATATCGCG CCGGGCTCCC GTTTCGTCAA GGAGGCCAGG
GGAGGGGAGG CCGGCGCCGG CTACCACCTG CTGCTCCTGT GCGAGAACAT GACCGGCTAC
CGGAACCTGT CCAAACTGGT CTCCATCGGC TTCAAGGAAG GGTTCTACTA CAAGCCGCGC
ATCGACAAGG AGGTCCTGGC CGAGAACGCC GAGGGGCTCA TCTGCCTTTC CGCCTGCCTC
AAGGGGGAGG TTGCCTATCT GTGCGAGCGC GACCGGGTCG CCGAGGCGGT GGACGTGGCC
CGCTGGTATG CCGATCTCTT CCCGGACCGC TACTACATCG AGCTTCAGGA AAACGGCCTC
GTTGAACAGG ACAAGGCCAA CCGGGGGCTG CTGGAGGTGG CGCGGGAAGT GGGTCTGCCG
CTGGTGGCCA CCAACGACTG CCACTATCTC AACCGGGAGG ATGCCCGGGC CCACGAGGTG
CTCCTCTGCA TCCAGACCGG CAAGACCATG AACGATCCGT CGCGGATGCG CTTCTCCGTT
GACGAGTTTT ACGTGAAGAC CCCCGAGGAG ATGGCCGCCG CATTCCACTA TGCGCCCGAG
GCGATCTCCA ACACCGTGAA GATCGCCGAG CGGTGCGATC TTTCCTTTGA CTTCAAGACC
TATCACTTCC CCCGCTTCGA GCCCCCCGTC GGCCTGAGCC TTGATCAGAT GCTGGAGGAG
GCTGCCCGCA CGGGACTGGA GTCGCGCCTG ACCGCTATCC GGGCCAAGCA CTCGTCCATG
ACCGCCGAGC AGGAGCAGGC CTACTGGGAC CGCCTCGCCA TCGAGCTCGC CTGCATCAAG
CAGATGGGGT TCCCGGGCTA CTTCCTGATC GTGGCCGATT TCATCAACTG GGCCAAGGAC
CACGGCATTC CCGTGGGCCC GGGCCGGGGC TCGGCGGCCG GCTCGCTGGT GGCCTACGCC
ATCCGGATCA CCGACCTGGA CCCGATCCCC TACAACCTCC TCTTCGAGCG CTTCCTTAAC
CCGGAGCGGA TATCCATGCC CGATATCGAC GTGGACTTCT GCCAGGATCG GCGCGAGGAG
GTGATCCAGT ATGTCACCGA GAAGTACGGT CGCGACAAGG TCTGCCAGAT CATCACCTTC
GGGACCATGT CCGCCCGGGC CGTCATCCGC GACGTGGGGC GGGCCCTGGA CATGACCTAC
GGCGAGGTGG ACCGGATCGC CAAGCTGGTG CCGGAGGTCC TGGGCATTAC ACTGGAAAAG
GCCATTGCGC AGGAGCCCAA GCTCAACGAG GCGGCCGAGG CCGATCCGCG GGTGAAGGAG
CTGCTGGAGG TGGCCCTGCG CCTGGAGGGG CTTGCCCGCC ATGCCTCCAC CCACGCGGCC
GGCGTGGTGG TGGCCCCCGA TGTGCTGGAG CAGTTCTGCC CGGTCTACAA GGACCAGAAG
AGCGGCTCGC TCACCACCCA GTACTCCATG AAGTACGTGG AGAAGATCGG GCTGGTCAAG
TTCGACTTCC TGGGGCTCAA GAACCTGACG GTCATATTCA ACGCGGTCCG GCACATCCGG
GCCGACAAAA AGCCGGACTT CGACATCGCC GCCCTGCGGG ACGACGACGA GGAGAGCTAC
AAGCTGCTCC AGGCCGGCAA CACCACCGGG GTGTTCCAGC TTGAATCCTC GGGGATGCGG
GAACTGCTCC GCAAGCTCAA GCCCTCCTGC TTCGAAGACA TCATCGCCGT CTGCGCCCTC
TACCGTCCCG GCCCCCTCGG CTCGGGCATG GTGGACGACT TCATCGACCG CAAGCACGGC
CGCAAGAAGG TGGTCTACGA TCTGCCGCAA CTGGAGCCGA TCCTCAAGGA CACCTACGGG
GTCATCGTCT ACCAGGAGCA GGTCATGCAG ATCGCCCGCT CCCTGGCCGG CTACTCCCTG
GGCGGCGCCG ACCTGCTGCG CCGGGCCATG GGCAAGAAGG ACCCGGCCGA GATGGCCAAG
CAGCGGGACA TCTTCCTGGA AGGGGCCAAG AACAACGGCA TCGATCTCCA GAAGGCCGGC
GCCATCTTCG ACCTGATGGC CAAGTTCGCC GAGTACGGGT TCAACAAGTC CCACTCGGCC
GCCTATGCCC TGGTGGCCTA CCAGACCGCC TATCTCAAGG CCCACTATCC GGTTGAGTTC
ATGGCCGCGC TCCTGACCGA GGACATGGCC AACACCGACA AGGTGGTCAA GAACATCGCC
GACTGCCGCG AGATGGGGAT CGAGGTGCTG CCACCGGACA TCAATGCCTC GGATCTGTCG
TTCCGGGTCC TGGGCAACTC CATCCGCTTC GGTCTCGGCG CGGTCAAGAA CGTGGGCGAG
TCGGCCATCG AAGCCATCAT CGAGGCCCGG GGCGACGGCC CGTTCAAGGA TATTTTCGAG
TTCTGCGAGC GGGTTGACCT GCGCAAGGTC AACAAGCGGG TGGTGGAATC CCTGATCAAG
TGCGGCGCCT TCGACTCGAC CGGCGGGCGG CGCTCCCAGC TCACGGCGGC CCTTGAAGAT
GCCATGTCCC TGGGCCAGAA GATCCAGCAG GAGAAGGAAA GCGCCCAGGT GTCGCTCTTC
GGTGCCGAGG AGATCGTCCG GACCAACGGC AACGGCAAGG GAAAGGTGCA GCTCCCCGAT
CTGCCCGAAT GGGACGACAA GTTTCTGCTG GCCCAGGAAA AGGAGGCCCT CGGCTTTTTC
ATCACCGGCC ATCCCCTGGG CCGCCACGAG AAGGACATCC GGCGCTTCAC CACCGCCGAC
ACCGCCACCC TGGAGGAGCG GGCCGACAAG AGCGAGGTCA AAATTTGCGG CATCGTGGCC
ACCATGAAGG AGCTCATGAC CAAGAAGGGG GACCGGATGG CCTTTGCCAC CCTGGAGGAC
CTGGTGGGCT CCGTGGAGGT GGTGGTCTTC CCCGAGGTCT TTGCCAAGGC GTCGGAATAC
CTCAAGTCGG ACGATCCGCT GCTGGTCACC GGCACCATCG ATAAGGGGGA GAAGAGCGCC
AAGATCATGG CCAGCGACGT GGTTCTTCTC CGGGACGTGA CCGCGCGGCA GACCTCACGG
GTGATCTTCG CCCTGCAGGG GGACGGCCTC GACCGCTATC GCCTGGAGGA GCTCAAGGCG
ATCATGCTCC GCCATCCCGG TACCTGCAAG GCCACCCTCA CCATCGACAT CCCGGACCAG
TGCCGCGCCA CCATTGCCCT GCCCGATTCC TGCATGGTTG CGCCCTCTGA CGAATTGACG
GTGGAGGTCA AGAACCTCTT CGGCTATCAT GCCGTTGCGT TTGAATAG
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| Protein sequence | MSFVHLHLHT QYSLLDGAIR LGDLVKKVKS HDMPAVAITD HGAMFGAMEF YLKCKDKDVK
PVIGAEVYIA PGSRFVKEAR GGEAGAGYHL LLLCENMTGY RNLSKLVSIG FKEGFYYKPR
IDKEVLAENA EGLICLSACL KGEVAYLCER DRVAEAVDVA RWYADLFPDR YYIELQENGL
VEQDKANRGL LEVAREVGLP LVATNDCHYL NREDARAHEV LLCIQTGKTM NDPSRMRFSV
DEFYVKTPEE MAAAFHYAPE AISNTVKIAE RCDLSFDFKT YHFPRFEPPV GLSLDQMLEE
AARTGLESRL TAIRAKHSSM TAEQEQAYWD RLAIELACIK QMGFPGYFLI VADFINWAKD
HGIPVGPGRG SAAGSLVAYA IRITDLDPIP YNLLFERFLN PERISMPDID VDFCQDRREE
VIQYVTEKYG RDKVCQIITF GTMSARAVIR DVGRALDMTY GEVDRIAKLV PEVLGITLEK
AIAQEPKLNE AAEADPRVKE LLEVALRLEG LARHASTHAA GVVVAPDVLE QFCPVYKDQK
SGSLTTQYSM KYVEKIGLVK FDFLGLKNLT VIFNAVRHIR ADKKPDFDIA ALRDDDEESY
KLLQAGNTTG VFQLESSGMR ELLRKLKPSC FEDIIAVCAL YRPGPLGSGM VDDFIDRKHG
RKKVVYDLPQ LEPILKDTYG VIVYQEQVMQ IARSLAGYSL GGADLLRRAM GKKDPAEMAK
QRDIFLEGAK NNGIDLQKAG AIFDLMAKFA EYGFNKSHSA AYALVAYQTA YLKAHYPVEF
MAALLTEDMA NTDKVVKNIA DCREMGIEVL PPDINASDLS FRVLGNSIRF GLGAVKNVGE
SAIEAIIEAR GDGPFKDIFE FCERVDLRKV NKRVVESLIK CGAFDSTGGR RSQLTAALED
AMSLGQKIQQ EKESAQVSLF GAEEIVRTNG NGKGKVQLPD LPEWDDKFLL AQEKEALGFF
ITGHPLGRHE KDIRRFTTAD TATLEERADK SEVKICGIVA TMKELMTKKG DRMAFATLED
LVGSVEVVVF PEVFAKASEY LKSDDPLLVT GTIDKGEKSA KIMASDVVLL RDVTARQTSR
VIFALQGDGL DRYRLEELKA IMLRHPGTCK ATLTIDIPDQ CRATIALPDS CMVAPSDELT
VEVKNLFGYH AVAFE
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