Gene GSU1389 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGSU1389 
Symbol 
ID2687892 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sulfurreducens PCA 
KingdomBacteria 
Replicon accessionNC_002939 
Strand+ 
Start bp1518711 
End bp1519319 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content53% 
IMG OID637126064 
ProductCRISPR-associated Cse3 family protein 
Protein accessionNP_952442 
Protein GI39996491 
COG category 
COG ID 
TIGRFAM ID[TIGR01907] CRISPR system CASCADE complex protein CasE/Cse3 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.831554 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATCTGA GTAAAGTCTT GATCAACGGG ACAGCCTGTC GCAATCCCTA CGAGATTCAT 
CGAGTGTTGT GGAAGCTCTT TCCCGAAGAT GCCGATGCCG AGCGTGATTT TCTCTTTCGT 
GTTGAGCGAT CCGGTCAACA GAGCGTGGAG GTGTTGTTGC AGTCCCGACG TGAACCTACT 
ATGGCTGCAT CTCGTGAAGT ACTCTTGATG GGAAGCAAAC CCTACCTTCT CAGCCTCCAG 
CAGGATCAGC AGCTGCGCTT TATGCTAGTC GCCAACCCGA TAAAGACGAT CAACGACGAA 
AGCGCGAGAC TAAATAGTGC CAATGAAATA AAGAAGTGCC GCGTTCCGCT GATTCGTGAG 
GAGGATCTGC GTGCATGGCT GAAACGGAAA CTTGAGGGCG TGGCCGTCAT TGAGGCGGTC 
GAGGTAGAAA AGCGGCCGGC TATGAACTTT CGTAAGGCCA GGGAAAAGCG GGTCGGTAAG 
GTACAGGCGG TTAGTTTTCA TGGTGTGTTG TCAGTGACGG ACCCCGTCGG GTTGATATCC 
CTGATCAATA CCGGCATCGG CCCTGCCAAG GCCTTTGGCT GCGGTTTGCT ATCGCTGGCT 
AGGACATAA
 
Protein sequence
MYLSKVLING TACRNPYEIH RVLWKLFPED ADAERDFLFR VERSGQQSVE VLLQSRREPT 
MAASREVLLM GSKPYLLSLQ QDQQLRFMLV ANPIKTINDE SARLNSANEI KKCRVPLIRE 
EDLRAWLKRK LEGVAVIEAV EVEKRPAMNF RKAREKRVGK VQAVSFHGVL SVTDPVGLIS 
LINTGIGPAK AFGCGLLSLA RT