Gene GSU1385 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGSU1385 
Symbol 
ID2687901 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sulfurreducens PCA 
KingdomBacteria 
Replicon accessionNC_002939 
Strand
Start bp1514972 
End bp1516492 
Gene Length1521 bp 
Protein Length506 aa 
Translation table11 
GC content57% 
IMG OID637126060 
Producthypothetical protein 
Protein accessionNP_952438 
Protein GI39996487 
COG category 
COG ID 
TIGRFAM ID[TIGR02547] CRISPR system CASCADE complex protein CasA/Cse1 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCTGC TGACCGAAGC ATGGATACCT GTGCGGCCAT TACCGGCCGG TGCGGCGTGC 
AAACTCACGT TGCGGCAACT GTTGTGCGAG GACGGCCGAT GGGAGCTGTG CCTACCGCGC
GACGACATGG AACTGGCAGC CCTGCAATTG CTGATCTGCA TGACGCAGGT TTTCTTTCCG
CCGCAGAGCA CTGCCGCGTT GAAACAGCGG ATAGTTGCTC CGTTGTCGTT GGATGAGTTT
GAGAGCGGTT GTGCGCCCTA TCGCGAGTGG TTCCGGCTCG ACCATCCCGA CTTTCCGTTC
ATGCAGGTGC GCAACGTCAG CGCCAAGGAC CCGACTCCCA TGGATAAGTT GCTGGCGGGA
CTGACGGGGG CGACAAACAG TTGCTTTGTG AACGAACCGG GGTTGGGCGC CTGCTTGTGC
GGTGGCTGCG CGGCCATCGC CCTGTTCAAC CAGTCATCCA ATGCGCCGAG TTTTGGCGGC
GGGTTCAAGG GGAGTCTGCG CGGTGGAGCG CCGGTGACAA CTCTGGTGCA AGGTGAACAT
TTGAGGCAAA CCGTCTGGCT CAATGTCTTG AGTGAAGAGC GTCTGACACA AATTATCCCG
TGGCATCACG CAACACGCAG TCAGCAACCG ACCTGGGTTG CACCAATCAA GGCGGGCGAG
ACAATTCCAT CACAAGCAAT CGGCGTACTG CGCGGGCTCT TCTGGCAGCC GGGACATCTT
GAACTGATGC CGCCGCAGGG AGAACAAGCT TGTATCTGTT GCGGTTTTGT CGAGAAACAG
GTTTATGCGG GATTCAACAA GGCAAAGTTT AACTACACCA TCGACGGACT CTGGCCCCAC
CCCCACGGCC CCCGTATCAG TTCGGTGAAG AAGGGAGAGC GGGAAGAAAA ATTTGTTTCC
TTCACCACCG CAGCCCCGGC TTGGACCCAT TTGAGCCGGT TTGTCGTGCA GCGGCAAACG
ACCAACAGTA AAGAGGAAGG TCAGGAGCCG GCCGCGGTGG TGCGGCAGGC GCAGGGACTA
CTCAATAAGT TACGCCTGGC AGTCGGTGGC TACCGCAACA ATCAGGCATC GATTCTTGAG
CGGCGCCACG AACTGATTTT TCTCAATGAC GGCTGGAGCG GGCATACAGA GGTGGTGCAT
GCGCTGGTCG GACAGGCGGT CGGGTATCGC GATGCACTGA ATAAGGCGCT TTTTGTATTT
TCCACGGGCT TCAAAGAGAT CAAGGGAGCC GGCGTTAAGG TTCATGAATT GGCTAAGGAG
CAATTCTACC GCCGTAGTGA AGATACGGTT CTCGATACCT TGGCACGCAT CGACTTTGAA
CAAGCAGCCC TGGCATTGCT GGCAATGGGG GATGGGCTCC ACGGTATTGT CGTTGGGCTT
TTTAATGAGT CGGTCGCACC CTACCGCAAC GATCCGGAAT TAATCCGTAC CACAGCCGTG
GCGCGTAAGA CACTGTACAA GCATTTAAAT GCACTCAAAC CACAACGGGA TGGAAGGAGG
GACGATGGAA CGAACGCATG A
 
Protein sequence
MNLLTEAWIP VRPLPAGAAC KLTLRQLLCE DGRWELCLPR DDMELAALQL LICMTQVFFP 
PQSTAALKQR IVAPLSLDEF ESGCAPYREW FRLDHPDFPF MQVRNVSAKD PTPMDKLLAG
LTGATNSCFV NEPGLGACLC GGCAAIALFN QSSNAPSFGG GFKGSLRGGA PVTTLVQGEH
LRQTVWLNVL SEERLTQIIP WHHATRSQQP TWVAPIKAGE TIPSQAIGVL RGLFWQPGHL
ELMPPQGEQA CICCGFVEKQ VYAGFNKAKF NYTIDGLWPH PHGPRISSVK KGEREEKFVS
FTTAAPAWTH LSRFVVQRQT TNSKEEGQEP AAVVRQAQGL LNKLRLAVGG YRNNQASILE
RRHELIFLND GWSGHTEVVH ALVGQAVGYR DALNKALFVF STGFKEIKGA GVKVHELAKE
QFYRRSEDTV LDTLARIDFE QAALALLAMG DGLHGIVVGL FNESVAPYRN DPELIRTTAV
ARKTLYKHLN ALKPQRDGRR DDGTNA