Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU1322 |
Symbol | ccdA |
ID | 2685951 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | + |
Start bp | 1447999 |
End bp | 1448727 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637125996 |
Product | cytochrome c biogenesis protein CcdA |
Protein accession | NP_952375 |
Protein GI | 39996424 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0785] Cytochrome c biogenesis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAATCAA CCAACATAAC CTTTGTGGGC GCATTCGTGG CGGGACTCCT GTCCTTCCTG TCCCCCTGCG TGCTGCCGCT TATTCCGTCC TTCATAACCT ACATCACCGG CCTCTCCTTC GCCGACATCC AGTCCGAGCA CCCGACCCAC AAGGTGCGGC AGCAGACCAT TGTCCACTCG CTTCTCTTCA TCGCCGGCTT CACCTTTGTC TTCGTGCTCC TCGGCGCCTC GGCGACCTTC ATCGGCGGAT TCCTCCATGA GCACATGAAC GTCATCCGCA AGGTTGGCGG CGCGCTGATC GTGATCTTCG GCATTCACGT ATCGGGCCTC GTGCCCATCC ATCTCCTGCT GGGGGAAAAG CGGCTCCAGG TCCACCGCAA ACCGGCCGGG TACCTGGGCA GCTTCCTGGT GGGGCTCGCC TTTGCCGCCG GCTGGACCCC CTGCATCGGA CCGATCCTGG CTTCCATCCT CATGGTGGCC GCCACCGAAG AGACCGTGAC CAAGGGGATC CTTCTCCTGT TCACCTATTC CATGGGGCTG GCCATTCCGT TCTTCCTGTC GTCCCTGGCC ATGCACCAGT TCCTGACCTT CTTCAACCGC TTCAAGAAGC ATATCCGCAT CCTGGAGATC GTCACCGGGC TTTTCCTTGT TGTCGTCGGC GTGATGATTT TCACCAATTA CCTGAGCGTC CTTTCCCGCT ACACCATGAA GTGGTTCGGG GGAATGTAG
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Protein sequence | MESTNITFVG AFVAGLLSFL SPCVLPLIPS FITYITGLSF ADIQSEHPTH KVRQQTIVHS LLFIAGFTFV FVLLGASATF IGGFLHEHMN VIRKVGGALI VIFGIHVSGL VPIHLLLGEK RLQVHRKPAG YLGSFLVGLA FAAGWTPCIG PILASILMVA ATEETVTKGI LLLFTYSMGL AIPFFLSSLA MHQFLTFFNR FKKHIRILEI VTGLFLVVVG VMIFTNYLSV LSRYTMKWFG GM
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