Gene GSU1267 details

Gene Information

• Locus tag: GSU1267
• Symbol: lepB
• ID: 2686585
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter sulfurreducens PCA
• Kingdom: Bacteria
• Replicon accession: NC_002939
• Strand: +
• Start bp: 1379195
• End bp: 1379863
• Gene Length: 669 bp
• Protein Length: 222 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 637125941
• Product: signal peptidase I
• Protein accession: NP_952320
• Protein GI: 39996369
• COG category: [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG0681] Signal peptidase I
• TIGRFAM ID: [TIGR02227] signal peptidase I, bacterial type

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.00305059
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGACTACA AGGAAACCCA GTACGGCCAG TCAACCCCGT CGGAGCAGGC TGCCGAGCCG 
GTCAAGAAAA AGCACATTGT CCGGGAATAC GCCGAGTCGA TCATTATCGC CGTCATTTTG 
GCCCTCATTA TCCGGACTTT CGTGGTACAG GCATTCAAGA TTCCCTCCGG CTCCATGGAG 
GACACGCTTG CCATCGGCGA TCATATCCTC GTCAGCAAAT TCATCTACGG CACCAAGATC 
CCCTTTGTGG ACGGCCGCTA CCTGAAGATC CGCGACCCGA AGCGGGGTGA CGTGATCGTC 
TTCGAATACC CCGAAGACCC CAGCAAGGAT TTCATCAAGC GGGTAATCGG TCTGCCGGGC 
GATACGATTC AAGTGGTGCA GAAGCAAGTC TTCATCAACG GCAAGCCGTT CTCGGTTCCC 
CAGGAGGTCC ACAAGGAAAA GGACGTAATC CCCGCGGCCC AGAATCCCCG CGACAATTTC 
GGACCAGTCA CGGTGCCGGA GAACAGCTAT TTCGTAATGG GCGACAACCG GGACCGTTCC 
TACGATAGCC GGTTCTGGGG CTTCGTCAAG AACAGCCAGA TCAAGGGACT TGCCTTCATC 
AAGTACTGGT CCTGGGACCG GGAAAAGTTC CGCGTACGCT GGGGAAGCAT CGGCGACATC 
ATCAAATAG 

 

Protein sequence

MDYKETQYGQ STPSEQAAEP VKKKHIVREY AESIIIAVIL ALIIRTFVVQ AFKIPSGSME 
DTLAIGDHIL VSKFIYGTKI PFVDGRYLKI RDPKRGDVIV FEYPEDPSKD FIKRVIGLPG 
DTIQVVQKQV FINGKPFSVP QEVHKEKDVI PAAQNPRDNF GPVTVPENSY FVMGDNRDRS 
YDSRFWGFVK NSQIKGLAFI KYWSWDREKF RVRWGSIGDI IK