Gene GSU1230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGSU1230 
Symbol 
ID2686692 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sulfurreducens PCA 
KingdomBacteria 
Replicon accessionNC_002939 
Strand
Start bp1333874 
End bp1334836 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content62% 
IMG OID637125904 
Producthypothetical protein 
Protein accessionNP_952283 
Protein GI39996332 
COG category[R] General function prediction only 
COG ID[COG2984] ABC-type uncharacterized transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGCTCA AAAAACTCTT CATAGCACTC ACGTGCATGC TCTGCCTCTG CTGCGGCGCG 
TCGTCGGCGT CTGCGGCGGG CAAGCTGGTG GCTGCCGTGC TCACCAGCGA TATGGAGCGT
TACCGTGATG CGTACCGTTC GTTCCTCAAG GCTCTGGCGG CGAAAGGGTA TGAGGAGGGG
GCCGTGGAGG TGGTGACGCA GACGCCCAAC CCTGACCCCA TCTCCTGGGC GAACAGTGTG
CGGAAATTCG ATGCCATCAA GCCCGACCTG CTCGTGACGT TCGGTGCTCC CGTCACCCTT
GCCGCAAAGC AGGAAACCAG CGGTATTCCC GTTGTGTTCG TGGACGTCTA CGGGCCGGTC
GAAACCGGCA TCTCGCGCAG CATGTCCCAG GCGGGGGGAA GCCTCTGCGG AGTCAGCTCC
AAGGTCCCCG TAGCAACGCT CATCAAGGCC ATGGGCGATA TCCGGCCCAT CAGGACTCTG
GGCGTCCTCT ACAATACCCG GGAAGCCGGC TCAATCCTTC AGCTCAAGGA GGTCAAGCGC
GTGGCGGCCC AGCAGGGGTT CGCGGTTGTC GAGGCGAATG TATCGTCCGC TGCGGGGCTC
GATACGGCGC TTACCTATCT GCTCGGCCGC GCTGACTGCC TCTTCGTCTC CGAGAGTTCG
GTGATCGGCA GAGGTTTCGA CCGCATCGTC AGGAAGGCTA CCGACGCACG TGTGGCGGTC
ATCTCACTTA CGCCCGGCTC TTCCGAGCGG GGGGCGCTGG TTTCCCTCGA GATCAGCCCG
ACCGAGCAGG GGCAACTGGC GGCGGATTAC GCATCCAAGA TCCTTTCCGG CCGAAAACCG
GGAGAGTTAC CCGTCTACAC ACCACGTAAG GTTGACCTGG TGCTCAACAT GGGAGTTGCC
AGAACGCTGG ATCTCCATGT ACCATTCAAA GCATTGAGCG CCGCCACACG AGTGATCAAG
TAG
 
Protein sequence
MALKKLFIAL TCMLCLCCGA SSASAAGKLV AAVLTSDMER YRDAYRSFLK ALAAKGYEEG 
AVEVVTQTPN PDPISWANSV RKFDAIKPDL LVTFGAPVTL AAKQETSGIP VVFVDVYGPV
ETGISRSMSQ AGGSLCGVSS KVPVATLIKA MGDIRPIRTL GVLYNTREAG SILQLKEVKR
VAAQQGFAVV EANVSSAAGL DTALTYLLGR ADCLFVSESS VIGRGFDRIV RKATDARVAV
ISLTPGSSER GALVSLEISP TEQGQLAADY ASKILSGRKP GELPVYTPRK VDLVLNMGVA
RTLDLHVPFK ALSAATRVIK