Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU1199 |
Symbol | |
ID | 2688309 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | + |
Start bp | 1302927 |
End bp | 1303490 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637125873 |
Product | nuclease, putative |
Protein accession | NP_952252 |
Protein GI | 39996301 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1525] Micrococcal nuclease (thermonuclease) homologs |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000552466 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAGAACA CGCTCTGGCT CGGGGTGACG CTCCTGCTTA TGGGGCTCAT CCTGGCGCTC TACCTGCTTA CCCCCGAGCG GTCTCCAGGA CCGCTGAAAT CCTCCGTCCC CCCCGCCGGG GACCGGGTTA TCACGGTGAA GGACGGCGAC ACGGTGGTCA TCGCCCCGGC AGGGGGCGGC AAGCCTTACC CCTGCAGACT CTACGGCATT GATACGCCCG AAACTCCGAA AAAACGGAAA CAGGGGCAGC CGTACGGACA GGAAGCGGCC GACGAGCTGA GCTCTCTCGT GCTCGGCAAG GAGGTGAAGG TTCTCCTGAC CGGCGACACG ACCTATAATC GCCAGGTGGG GACTATCGAG GTGGATGGGG TGAACGTGAA TCTGGAGATG GTGCGTCGGG GTTATGCCTG GGCCTATGTC CAGTACCTGC GGAGGCCCCA CGTGTCCGAG TACCGCGAGG CCGAAGAGGA CGCGCGCCGG CAACGGCTCG GGCTCTGGCA GGATCACAAC CCCGTGCCGC CATGGGAGTT TCGCAAGCGA CAGAGGCTCC AGAAGCTTGA CTAA
|
Protein sequence | MKNTLWLGVT LLLMGLILAL YLLTPERSPG PLKSSVPPAG DRVITVKDGD TVVIAPAGGG KPYPCRLYGI DTPETPKKRK QGQPYGQEAA DELSSLVLGK EVKVLLTGDT TYNRQVGTIE VDGVNVNLEM VRRGYAWAYV QYLRRPHVSE YREAEEDARR QRLGLWQDHN PVPPWEFRKR QRLQKLD
|
| |