Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU1164 |
Symbol | |
ID | 2686837 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | + |
Start bp | 1268258 |
End bp | 1269421 |
Gene Length | 1164 bp |
Protein Length | 387 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637125838 |
Product | ABC transporter, permease protein |
Protein accession | NP_952217 |
Protein GI | 39996266 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.440199 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGGAATCC CTTACTCTTA CAGCCTGCGC AATCTCTGGA CCCGGCGCCT CACTACCGTG CTGACGGCAT CGGGCATGGC GCTGGTGGTC TTCGTGTTCG CGGCGACTCT TATGCTCTCC GAGGGCCTGC GCAAGACCCT GGTGGACACC GGCTCGTGGG ACAACGTGGT GGTGATCCGC AAGTCCGCCC AGACAGAGGT GCAGAGCGGG GTGGACCGAT CCCAGGCGGC CATCGTGGAG ACCCAGCCCG AGGTGGCGAT GGCGGAAGGA CAACGGTTGG TGGCCAAGGA GTTGGTTGTC CTCATCAGCC TGCCGAAGCG GGGAACGGGA AAGCCGTCCA ACGTGGTGAT CCGTGGCATC GGCGCGCCAT CGCTTCTGCT GAGACCCCAG GTGAAGCTTC GGGAGGGGCG GATGCCCCGG CCCGGCTCGG CGGAGATTAT CGCCGGGGCG AGCATCGCCA AGCGGTTCCA GGGGGGAGGG ATCGGCGAAA CCCTGCGCTT CGGCATGCGG GACTGGACCG TGGTGGGTAT CTTCGATGCC GGCAACACGG GGTTTTCTTC GGAGATATGG GGGGACGTTG ATCAGCTGAT GCAGGCCTTC CGGCGTCCGG TCTACTCGTC GGTCATCTTC AAACTCAGGG ATGCCGCCGA GTTCGGTCGC GTCAAGGCCA GGCTGGAGGC GGACCCGCGC CTCACCGTGG AGGCAAAGCG CGAGATCCGC TTCTATGCCG ACCAATCGGA AGCCATGGCC ACGTTCCTGA ACATCCTGGG CGTTACACTG ACGGTGATTT TTTCCCTGGG CGCGGTCATC GGTGCCATGA TCACCATGTA TGCCGCCGTG GCCAACCGGA TCACCGAGAT CGGTACGTTG CGCGCACTCG GTTTCCAGCG GCGAAGCATT CTGGGGGCGT TTATCCTGGA ATCGCTGTTT CTGGGGTTGC TGGGAGGGGT GGTGGGGGTC TTTTTCGCCT CGTTCATGCA GCTGGTGACC ATCTCAACCA TGAACTGGCA GACTTTTTCG GAGCTGGCGT TCAGCTTTAC CCTTACCCCA CGCATCATCG GGGCGTCGCT GGTGTTTTCC CTGGTCATGG GGTTCGTGGG GGGGCTGCTT CCGGCGTTCC GGGCAGCGCG GATGAATATC GTGGACGCCC TGCGGGCGAA CTGA
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Protein sequence | MGIPYSYSLR NLWTRRLTTV LTASGMALVV FVFAATLMLS EGLRKTLVDT GSWDNVVVIR KSAQTEVQSG VDRSQAAIVE TQPEVAMAEG QRLVAKELVV LISLPKRGTG KPSNVVIRGI GAPSLLLRPQ VKLREGRMPR PGSAEIIAGA SIAKRFQGGG IGETLRFGMR DWTVVGIFDA GNTGFSSEIW GDVDQLMQAF RRPVYSSVIF KLRDAAEFGR VKARLEADPR LTVEAKREIR FYADQSEAMA TFLNILGVTL TVIFSLGAVI GAMITMYAAV ANRITEIGTL RALGFQRRSI LGAFILESLF LGLLGGVVGV FFASFMQLVT ISTMNWQTFS ELAFSFTLTP RIIGASLVFS LVMGFVGGLL PAFRAARMNI VDALRAN
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