Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU1059 |
Symbol | sucD |
ID | 2686953 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | + |
Start bp | 1145107 |
End bp | 1145982 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637125728 |
Product | succinyl-CoA synthase, alpha subunit |
Protein accession | NP_952112 |
Protein GI | 39996161 |
COG category | [C] Energy production and conversion |
COG ID | [COG0074] Succinyl-CoA synthetase, alpha subunit |
TIGRFAM ID | [TIGR01019] succinyl-CoA synthetase, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0687509 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCATAC TCATCAACAG CGATTCGAAA ATAGTCGTTC AGGGCATAAC CGGCCGCAGC GGTCTCTTCC ATACCCAGCA GTGCCGGGAC TACGGCACCA GGATCGTGGC CGGCGTCACC CCCGGCAAGG GGGGGATTCA CATCGAAGGG ATACCGGTCT TCAACAGCGT CGAGGAAGCG GTCAGGTACA CCGGGGCCAA TGTGTCCATG ATCTTCGTCC CGCCGCCGGC CGCGGCCGAC GCCATCCTTG AGGCGGCCGA CGCGGGACTG GAACTGGCGG TCTGCATCAC CGAAGGAATC CCGGTGCGCG ACATGGTTCC GGTGAAGCGC ATCCTCCAGG AGAGCCGGAC CCGGCTCGTG GGACCGAACT GCCCTGGCGT CATCACTCCG GGCGAGTGCA AGGTGGGGAT TATGCCCGGC TACATTCATA AGCCCGGCAA GATTGGTGTG GTCTCCCGCA GCGGCACCCT CACCTACGAG GCGGTCAAGC AGATCACCGA GGCGGGGCTC GGTCAGTCCA CCTGCGTCGG CATCGGCGGC GACCCGATCA TCGGCATGAA CTTCATTGAC GTGCTCAAGC TCTTTAACGA GGACAAGAAC ACCGAGGCGG TCTTCATGAT CGGTGAGATC GGCGGCACTG CCGAGGAAGA AGCGGCCTAC TGGATCAAGG AAAACATGAA GAAGCCGGTG GCATCCTTTA TCGCCGGCGT CACCGCGCCT CCGGGCAAGA GGATGGGGCA TGCCGGCGCC ATCATCACCG GCGGCAAGGG AAAAGCCGAG GACAAGATCC GGACCCTTTC CGAATGCGGG GTGGTGGTGG CCACCAGCCC CACCAAGATG GGCGTCGCCA TGCTGGAAGC CCTGGGCAAG GGCTAG
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Protein sequence | MSILINSDSK IVVQGITGRS GLFHTQQCRD YGTRIVAGVT PGKGGIHIEG IPVFNSVEEA VRYTGANVSM IFVPPPAAAD AILEAADAGL ELAVCITEGI PVRDMVPVKR ILQESRTRLV GPNCPGVITP GECKVGIMPG YIHKPGKIGV VSRSGTLTYE AVKQITEAGL GQSTCVGIGG DPIIGMNFID VLKLFNEDKN TEAVFMIGEI GGTAEEEAAY WIKENMKKPV ASFIAGVTAP PGKRMGHAGA IITGGKGKAE DKIRTLSECG VVVATSPTKM GVAMLEALGK G
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