Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU1016 |
Symbol | |
ID | 2687448 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | + |
Start bp | 1097041 |
End bp | 1098681 |
Gene Length | 1641 bp |
Protein Length | 546 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637125686 |
Product | Trk family potassium uptake protein |
Protein accession | NP_952070 |
Protein GI | 39996119 |
COG category | [R] General function prediction only |
COG ID | [COG2985] Predicted permease |
TIGRFAM ID | [TIGR01625] AspT/YidE/YbjL antiporter duplication domain |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0663746 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTTCAA TCCTCCTTGA AAACCCTCTT CTTGTGTTGT TCCTCGTGGC GGCAATCGGC TATCCCCTCG GCAGGATCAA AATCCGGGGA TCGAGTCTCG GAGTTGCGGC CGTGCTCTTC GTGGGGCTGG CCATGGGATC GCTCCATCCC GAGTTGAAGC TCCCCGAAAT CGTCTATGTC CTGGGCCTCG CCCTGTTTGT CTACACCATC GGCCTCTCCA GCGGCCCCGC CTTTGTGGCA TCCCTGAAAC GCGAGGGAAT CCGCAACAAC GCCCTGATCA TCGGAATGCT CCTGGTCGCT GCCGGGCTGG TCGTGGGAGC CCAACGACTC CTGGGGTTCA AGGGGACCGT CACCGCGGGC CTCTTTGCCG GAAGCCTCAC CAATACCCCC GCCTTGGCCG GGGCACTGGA AACCATCAAA CACATCGCCT CGCCGGAACT GCGTGAACTG CTGCTGGCCG AACCGGTGGT GGGTTACTCG GTGGCCTACC CTATGGGGGT CATGGGGGTG GTGCTCGCCA TCAGTCTGGT GCAGAAGCTC TGGAACGTCG ATTACGGCGA GGAAGGGAAA CGGCTCAGGC TTGCTGGAAC CGCGTCGGAG GCGCTGCGGA GCATGACGGT ACGCATCGCC TGGCCCGGGG CAGGGCGCCA CACCGTGGCC GAGCTGGCCC GCCATGAGAA GTGGGACGTG ATTTTTGGCC GGATCCGGCG CGGGGATTCA TATCTTCTCA CCGGCCCGCA GGTTCGCTTC CAGCCGGGCG ATCTTGTTAC CGCAGTGGGA ACCGAGACGG AGCTGCGGCG GGTAGCCGCC TTTCTGGGGG AAGTGAGCGA AGAAGAGATC ACCGTTGACC GGAGCGAGTA CGACTACCGG CGGATCTTTG TCTCGAATCC CCGGGTAGCC GGGCGGCAGC TGGGAGAGCT TAACCTGTTC GAGAACTACG GTGCCACCGT TACGCGGGTG CGGCGTGGCG ACGACGACTT CCTGCCCCAT GACGACATGG TCCTCGAGCT TGGCGACCGG GTACGTGTCG TCACGCACCG CGATCACATG GCAGAAGTGA CGGCCTTTTT CGGCGATTCC TACCGGGCCG TAAGCGAGGT GGATATCCTC ACTTTCAGCT TGGGACTGGC CTTGGGACTC CTGCTCGGCA TCATCCCCAT TCCCCTGCCC GGAGGCATCA CCCTCAAGCT CGGTTTCGCC GGCGGGCCCC TCATAGTGGC GCTGATTCTC GGCACCATCG GCCGGTCGGG CTCTATGGTC TGGAGCCTGC CCTACAGCGC CAACATGACC CTGCGCCAGA TCGGCCTGGT ATTGTTCCTG GCCGGAGTCG GCACACGGGC GGGCTACGGT TTCGTCACCA CCCTCGCCAA GGGGGGCGGA TTGGCCATCT TCGCCGCCGG TGCGGTCGTC ACCTGTCTTA CGGCCCTCGC CACCCTCTGG ATCGGTCACA AACTCATGAA AATTCCCATG AGCATCCTCA TCGGTATGGT CGCCGGCCTC CAGACCCAAC CCGCCGTTCT CGGCTACGCC CTGGAGCAGA CCGGCAACGA TCTCCCCAAT ATCGGCTACG CCTCGGTCTA TCCCGTGGCG ACCATCAGCA AGATTCTCAT TGTGCAGATA CTGCTTACGA TGCTCATGTG A
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Protein sequence | MLSILLENPL LVLFLVAAIG YPLGRIKIRG SSLGVAAVLF VGLAMGSLHP ELKLPEIVYV LGLALFVYTI GLSSGPAFVA SLKREGIRNN ALIIGMLLVA AGLVVGAQRL LGFKGTVTAG LFAGSLTNTP ALAGALETIK HIASPELREL LLAEPVVGYS VAYPMGVMGV VLAISLVQKL WNVDYGEEGK RLRLAGTASE ALRSMTVRIA WPGAGRHTVA ELARHEKWDV IFGRIRRGDS YLLTGPQVRF QPGDLVTAVG TETELRRVAA FLGEVSEEEI TVDRSEYDYR RIFVSNPRVA GRQLGELNLF ENYGATVTRV RRGDDDFLPH DDMVLELGDR VRVVTHRDHM AEVTAFFGDS YRAVSEVDIL TFSLGLALGL LLGIIPIPLP GGITLKLGFA GGPLIVALIL GTIGRSGSMV WSLPYSANMT LRQIGLVLFL AGVGTRAGYG FVTTLAKGGG LAIFAAGAVV TCLTALATLW IGHKLMKIPM SILIGMVAGL QTQPAVLGYA LEQTGNDLPN IGYASVYPVA TISKILIVQI LLTMLM
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