Gene GSU0916 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGSU0916 
Symbol 
ID2687168 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sulfurreducens PCA 
KingdomBacteria 
Replicon accessionNC_002939 
Strand
Start bp982110 
End bp983294 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content63% 
IMG OID637125586 
Productmethyl-accepting chemotaxis protein 
Protein accessionNP_951970 
Protein GI39996019 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00484593 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGTCAC TGTGGAACTT CTATCTCAAC TTTTCAGTAA AGGCCCGTCT TGCCACGCTC 
TGCGTCTGCT ACAGCGCCTG CATCGCCGCG ACGGCACTGG CCGCCCAAGC CGATTCGGCC
CTTATCAAGT ACGGATCCGT GATCCTCTTT ATCGTCCTGG GGGGTATCTT CGGCTGGATC
AACATCTGGT CCATCAACCG GCCGATCCAG AGGGCAATCG GTTATCTGCA AACCATGGCG
CGTGGTGACC TGAGCCAGGA AATCACGGTG TTCCGGAAGA ATGAGTTCAG CAAGATGCTC
CTGACCATGC GGGAGCTCCA GGGCTCCATG CGCGACATCA TCTCCGGCAT CCAGACTACG
GCGGCCGATC TGTCCGCCGC CTCCGACCTG CTCCGCACCA CCTCCTCGCA GATTGCCGAA
GGGACCGACC ACGCCTCCCA AGAATCGGCA TCCATCACCA CGGCGGTGGA TGAAATGGCC
TCGGTGAGCC TCGCCATCTC GCACAACTGT CAGAAGATGG CAGAGGAGGC GTCGGGCACC
GGCCACGCCA CCGAAAGTGG AACGGAAACC ATCTCCCGGA TGACCACTAT CATGGAGGCG
GTCGAGCAGA TGGTGTCCGG CACCATGGCG GCGGTCAACG CGCTGGGCGC CAACTCCGAA
CGGATCGGCG ACATCATCAC CGCCATCAGG GACATTGCCG ATCAGACCAA CCTGCTGGCG
CTCAACGCCG CCATCGAGGC GGCCCGTGCC GGCGAGCAGG GACGCGGCTT CGCCGTGGTG
GCCGACGAGG TGCGCAACCT CGCCGAGCGG ACGACCTCGT CCACCAGGGA AATCCAGTCC
ATCATCGGCG CTCTGCAGGG CGACGTCAAA AACGTGATGG GCCTCATGGA GCAGAGCTCC
GACAGTGTCC GCAACGGCAC CCGGGACATG CATCTCTCCC GCCAGGCCAT CGGGGCCATC
AAGGAGCACA TTGCCCCCCT CATTGACCAC GTCTCCCAAG TGGCCATCGC GGCGGAAGAG
CAGTCGGCCA CCACTGCCAG CATCACGGAG AACATCCACC GCATCGCGCT GGTGATTCGC
GACGCAGCCC AGGGAGCCCA GCAGACGGAA ACCGCGGCGG CCGATCTGGC GCAGTCGGCG
ACGGAACTCC AGCAGATGGT CAACCGCTTC AAGCTCTCGG CCTGA
 
Protein sequence
MVSLWNFYLN FSVKARLATL CVCYSACIAA TALAAQADSA LIKYGSVILF IVLGGIFGWI 
NIWSINRPIQ RAIGYLQTMA RGDLSQEITV FRKNEFSKML LTMRELQGSM RDIISGIQTT
AADLSAASDL LRTTSSQIAE GTDHASQESA SITTAVDEMA SVSLAISHNC QKMAEEASGT
GHATESGTET ISRMTTIMEA VEQMVSGTMA AVNALGANSE RIGDIITAIR DIADQTNLLA
LNAAIEAARA GEQGRGFAVV ADEVRNLAER TTSSTREIQS IIGALQGDVK NVMGLMEQSS
DSVRNGTRDM HLSRQAIGAI KEHIAPLIDH VSQVAIAAEE QSATTASITE NIHRIALVIR
DAAQGAQQTE TAAADLAQSA TELQQMVNRF KLSA