Gene GSU0606 details

Gene Information

• Locus tag: GSU0606
• Symbol: alr
• ID: 2685372
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter sulfurreducens PCA
• Kingdom: Bacteria
• Replicon accession: NC_002939
• Strand: +
• Start bp: 641051
• End bp: 642199
• Gene Length: 1149 bp
• Protein Length: 382 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 637125273
• Product: alanine racemase
• Protein accession: NP_951664
• Protein GI: 39995713
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG0787] Alanine racemase
• TIGRFAM ID: [TIGR00492] alanine racemase

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGACAGCC GGCCCACCAT TGCTGAAGTC GATCTCGCCG CCCTCCGCCA CAACTACGAC 
CTTGTCGTCC GTACGATTCC CCGGGGGTGC GGAATCCTGG CGGTAGTCAA GGCCGACGCC 
TACGGCCACG GTTTCATGGA TATCGCCCGC GAGTTGGAGA CACTGGGAGT GACTGCCTTC 
GGCGTTGCCT TTCTGGCCGA GGGAATTCAA CTGCGCAAGA GCGGAATCGA TCGTCCCGTC 
CTGATCCTGG GAGGGGTTTA TCCCGGCCAG GAACGCAAGT GTGTCGGGTT CAATCTGTCC 
ACGGCCCTGT TCAGCCTGGA GCAGGCGCGG GTTCTGGACG ATGCGGCCGG TCGCCTGTAT 
CGCCGGGCCA GGGTCCATGC GAAGATCGAT ACCGGCATGG GGCGCCTCGG CATCCCCCAC 
GAGGAGGCGT CGGCCTTTTT TAGCGCCCTG CGGGAGTTGA AGCACCTGGA CCTGGAGGGG 
ATCATCTCCC ACTTCGCCTC CGCCGACGAA CTCGACGAGG ATGGCCGGCG CTACTCCGAT 
CTCCAGGCGA GCCGGTTTGC CGCGGCGGTC GCGGCGGCCC GCCACGAGGG GTTCGAGCCT 
CGCTATGTCC ATATCGCCAA CAGCGCGGCC GCCTTCGGGA TGGACCTGCC GTTCTGCAAC 
CTCGTCCGGC CCGGCATCGT CCTCTACGGC GCGCTCCCTT CCGGCGACTT CGAGGGGAAG 
ATGGCGCTCA AGCCCATCAT GCGCCTGCGC AGTTCCATCG CCATGCTCAA ATGGGTGGAA 
CCGGGCACAA GCATCAGCTA CGCCCGCCGC TTCACCGCTC CCGACCGGCG ACTCGTGGCC 
AGTATTCCGG TTGGCTACGC AGACGGCTAC AGCCGTTCTC TCACCAACCG TGGGGAGGTT 
GTCGTGCGCG GCCGGCGCGC TCCGGTCGTG GGCACCGTCT GCATGGACTG GATCATGGCC 
GACGTGACCC ACGTCTCCGG CGTGACCGTT GGCGACGAGG TGACGCTTCT GGGGTGCGAC 
CAGGAGGGAA ACTGCGTCCG TGCCGAAGAA CTTGCCGAGT GGGCCGGTAC CATCCCCTAC 
GAAATTTTCT GCGGCATCAG CAAGCGGGTG CCGCGCGTCT ACCTCAACCC GTCGATCAGG 
CACAGGTGA 

 

Protein sequence

MDSRPTIAEV DLAALRHNYD LVVRTIPRGC GILAVVKADA YGHGFMDIAR ELETLGVTAF 
GVAFLAEGIQ LRKSGIDRPV LILGGVYPGQ ERKCVGFNLS TALFSLEQAR VLDDAAGRLY 
RRARVHAKID TGMGRLGIPH EEASAFFSAL RELKHLDLEG IISHFASADE LDEDGRRYSD 
LQASRFAAAV AAARHEGFEP RYVHIANSAA AFGMDLPFCN LVRPGIVLYG ALPSGDFEGK 
MALKPIMRLR SSIAMLKWVE PGTSISYARR FTAPDRRLVA SIPVGYADGY SRSLTNRGEV 
VVRGRRAPVV GTVCMDWIMA DVTHVSGVTV GDEVTLLGCD QEGNCVRAEE LAEWAGTIPY 
EIFCGISKRV PRVYLNPSIR HR