Gene GSU0587 details

Gene Information

• Locus tag: GSU0587
• Symbol: thiE
• ID: 2685827
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter sulfurreducens PCA
• Kingdom: Bacteria
• Replicon accession: NC_002939
• Strand: -
• Start bp: 620816
• End bp: 621457
• Gene Length: 642 bp
• Protein Length: 213 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 637125253
• Product: thiamine-phosphate pyrophosphorylase
• Protein accession: NP_951645
• Protein GI: 39995694
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0352] Thiamine monophosphate synthase
• TIGRFAM ID: [TIGR00693] thiamine-phosphate pyrophosphorylase

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.819904
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGGCTAAGG TCGATTTTTC GCTCTACCTG ATCACCGACC GCCACCAGGC TGGTGGCAGG 
GACCTGCTCG CCGTGGTCGA GGGAGCCCTG GCCGGTGGCG TGCGGTGCGT TCAACTCAGG 
GAAAAGGACC TGCCGGCCCG GACGCTGCTT GAGCTGGCCC GGGCCATGCG CCGCCTCACC 
GACCGCTTCG GGGCCAGGCT CCTGATCAAC GACCGGGTCG ACATCGCCCT GGCCGCGGGA 
GCCGACGGCG TTCACCTGGG CGAGGAGGGC ATGCCGGCTG CCGTGGCGCG GGAACTGCTC 
GGTTCCGGGC GACTCATCGG TGTTTCGTGT CACGGCCGCG GCGGGGCAGC AGCAGCCGTA 
GCACAGGGGG CAGACTTCAT CACGTTCGGG CCGGTCTACC CCACCCCGTC GAAAGCAGCC 
TACGGTGAGC CGGTGGGCAT TGACCAACTG GCCGCAACGA CGAAGGAGAT ACACATTCCG 
GTGTTCGCCT TGGGAGGAAT CAAGGAGGCG AACATCCCCG AGGCGCTGGC TGCCGGTGCG 
GCAGGGGTTG CCCTGATTTC TGCCATCATC GCCGACCCGG ACCCCAGGGA ACGCGCCCGG 
GCGCTCCTTG CGCTCCTGCC GCCCCGAACC CGAGACGAGT AA 

 

Protein sequence

MAKVDFSLYL ITDRHQAGGR DLLAVVEGAL AGGVRCVQLR EKDLPARTLL ELARAMRRLT 
DRFGARLLIN DRVDIALAAG ADGVHLGEEG MPAAVARELL GSGRLIGVSC HGRGGAAAAV 
AQGADFITFG PVYPTPSKAA YGEPVGIDQL AATTKEIHIP VFALGGIKEA NIPEALAAGA 
AGVALISAII ADPDPRERAR ALLALLPPRT RDE