Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU0500 |
Symbol | typA |
ID | 2686087 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | + |
Start bp | 533056 |
End bp | 534852 |
Gene Length | 1797 bp |
Protein Length | 598 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637125166 |
Product | GTP-binding protein TypA |
Protein accession | NP_951558 |
Protein GI | 39995607 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1217] Predicted membrane GTPase involved in stress response |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR01394] GTP-binding protein TypA/BipA |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGGAGA GAATCAGAAA CATCGCCATC ATTGCCCACG TTGACCACGG CAAGACCACT CTCGTGGATG CCATGCTCAA GCACGCCGGA GTGTTCCGGG AAAACGAAGC CATCACCGAG CGGGTCATGG ATTCCAACGA CCTGGAGAAG GAGCGGGGCA TCACCATCCT GGCAAAAAAC CTGTCGGTCC ACCATGGCCG CTACAAGATC AACATTGTCG ATACCCCGGG CCACGCCGAC TTCGGCGGCG AGGTGGAGCG GGTGCTCAAG ATGGTCGATT CGGTGCTGCT TCTGGTCGAT GCCCTGGACG GCCCCATGCC CCAGACCCGC TTCGTGCTCA AGAAGTCCCT CGACCTCGGT CTGAAGCCGA TCGTGGTCAT CAATAAGATT GACCGCCCCG GTTCACGCCC CGACGAGGTG GTGGACATGG TTTTCGACCT GTTTTGCGAA CTGAACGCGA CCGATGAGCA GCTCGACTTC CCCATCGTCT ATACCAGTGC CAAGCTCGGA TTCGCCAAAC TCGACCTCAA TTCCGACTCT AACAGCATGG AGCCCCTCTT CGCGGTAATC GAGAGTAACG TCCATCCGCC GGCCGGCGAT TCGAAGGCCC CGTTCCAGCT CCTCGTGACC AATATCGACT ACAACGACTA CATCGGCCGG ATCGCCACCG GCAGGATATT CAACGGCCGG GTGAAGGCCG GCGAGACCGT GGCGCTCGTG CGGCGCGACG GGAGCATCGA GCGGGGACGC ATCACCAAGC TCCTGGGATA CGAGGGGCTC AAGCAGGTGG AGATCCCCGA GGCGTGTACC GGCGACATCG TTACCGTGGC CGGTTTTGAC GACGTGGGCA TCGGCGAGAC GCTGGCCGCT GCAGACAATC CGGTGGCGCT TCCCTATGTG TCGATCGACG AGCCGACCAT TTCAATGAAC TTCATTGTCA ATTCCTCCCC CTTTGCCGGC CGTGAGGGGA AGTTCGTCAC CTCCCGCAAC ATCCGGGAGC GCCTTGACCG GGAGTTGCGC ACCAACGTGT CGCTACGGGT GGAGGATACG GCCAACGCGG ACACGTTCAA GGTTTCCGGC AGGGGCGAGC TTCACCTGTC CATCCTTATC GAGAACATGC GGCGCGAAGG ATTCGAGATG GCGGTTTCCA AGCCGGAGGT CATCTTGCGG GTGATCGACG GCACGAAGAT GGAGCCGATG GAGTACCTGG TGGTGGACGT TCCCTCCGAG TTCCAGGGTG CCATCATCGA GAAGATGGGA CCTCGCAAGG GGGAGATGAC CTCCCTGCAG CCCATGGGCG AGACAGTGCG GCTGGAGTTT GTCGTGCCGG CCCGGGGGCT CATCGGGCTG CGGGGAGAAC TCCTCACCGA GACGCGGGGC ACTGCGGTCA TGACCCACAC CTTCCACGAC TATGCCCCTT ACAAGGGTGA TATCCCGGGG CGCAAGAACG GCGTCCTCAT TGCCATGGAA CTCGGCGAAA CCACTGCCTA TGCCCTCGAC GCACTCCAGC CCCGGGGAAT CCTCTTCATC GGTCCCGGTG TGGAAGTCTA CGGGGGGATG ATCATCGGCC AGCACGCCAA GGACAACGAT CTGGACGTGA ACCCCTGCAA GGGAAAGAAA CTTACCAATG TCCGTGCCTC CGGTTCGGAC GACGCCATCA AGCTCACCCC GCCGCGCATC CTTACCCTGG AGCAGGCCCT GGAGTTCATT GACGACGACG AACTGGTAGA AGTGACCCCG CAGTCCATCA GGCTCAGAAA GAAAGAACTC GACCCGAACA AGCGGAAACG GAAGTGA
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Protein sequence | MQERIRNIAI IAHVDHGKTT LVDAMLKHAG VFRENEAITE RVMDSNDLEK ERGITILAKN LSVHHGRYKI NIVDTPGHAD FGGEVERVLK MVDSVLLLVD ALDGPMPQTR FVLKKSLDLG LKPIVVINKI DRPGSRPDEV VDMVFDLFCE LNATDEQLDF PIVYTSAKLG FAKLDLNSDS NSMEPLFAVI ESNVHPPAGD SKAPFQLLVT NIDYNDYIGR IATGRIFNGR VKAGETVALV RRDGSIERGR ITKLLGYEGL KQVEIPEACT GDIVTVAGFD DVGIGETLAA ADNPVALPYV SIDEPTISMN FIVNSSPFAG REGKFVTSRN IRERLDRELR TNVSLRVEDT ANADTFKVSG RGELHLSILI ENMRREGFEM AVSKPEVILR VIDGTKMEPM EYLVVDVPSE FQGAIIEKMG PRKGEMTSLQ PMGETVRLEF VVPARGLIGL RGELLTETRG TAVMTHTFHD YAPYKGDIPG RKNGVLIAME LGETTAYALD ALQPRGILFI GPGVEVYGGM IIGQHAKDND LDVNPCKGKK LTNVRASGSD DAIKLTPPRI LTLEQALEFI DDDELVEVTP QSIRLRKKEL DPNKRKRK
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