Gene GSU0486 details

Gene Information

• Locus tag: GSU0486
• Symbol: ilvA
• ID: 2686101
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter sulfurreducens PCA
• Kingdom: Bacteria
• Replicon accession: NC_002939
• Strand: -
• Start bp: 516396
• End bp: 517604
• Gene Length: 1209 bp
• Protein Length: 402 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 637125153
• Product: threonine dehydratase
• Protein accession: NP_951545
• Protein GI: 39995594
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG1171] Threonine dehydratase
• TIGRFAM ID: [TIGR01127] threonine dehydratase, medium form

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.420831
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTCCCCT ACACACTGAT TCAGGAAGCC GACGACCGAC TCAGGAAGCG GGTTCGTCGC 
ACCGAGCTCA TCCACTCCCA TCACTTCAGC GAGAAACTGG GAATCCCGAT CTATTTCAAG 
TGCGAGAACC TCCAGCGCAC CGGTGCGTTC AAGATCCGAG GCGCCCTGAA CTTCATGACG 
TCGCAGCCGC GGGAGGCACT GGCAAAGGGT GTCATTACCG CTTCTGCCGG TAACCATGCC 
CAAGGAGTCG CGTTCTCGGC CGACCTGCTG GGAGTGCCGT CCACGGTGTT CATGCCGGAA 
AGCACGCCGC CGCAGAAGGT CTTTGCCACC CGTGACTACG GCGCCGAGGT GGTACTCACC 
GGCCGCAACT TCGACGAGGC ATACGCTGCA GCGGTCCAGG CGCAGGAGGA ACGGGGCGCC 
CTCTTCGTCC ACCCCTTTGA CGACCCGCTC GTGATGGCCG GGCAAGGCAC CATCGGCCTG 
GAAGTTCTCC AGGAGCTTCC CGATGTAGCC AATATCCTCG TCCCCATCGG CGGCGGCGGT 
CTCATCGCGG GCATCGCCAC GGCCATCAGA GAAACCCACC CCCACGTGCG GATCATCGGC 
GTTGAAACAG CGGCGGCCCC ATCCGCCCAC TATTCGCTGC AAAAGGGGAA GATCGTCCAG 
GTCCCCGTGA CGGTCACCCT TGCCGACGGC ATCGCGGTCA AGAAGCCAGG GGTGAACACC 
TTTCCCATCA TCAGGGACTT GGTGGACGAG GTGGTCTTGG TGGAAGAAGA GGAGATCGCC 
CTTGCCATCG TGGCGCTGCT GGAGCGAACC AAGCTCTTGG TCGAGGGGGC CGGGGCCGTT 
CCGTTGGCCG CGCTTCTCAA CCGGCGGGTG ACTGATCTTT CGGGAAAAAC GGTCTGCGTG 
CTGTCGGGCG GGAATATCGA CGTGAAGACC ATCTCAGTAG TGGTGGAACG GGGTCTGGTG 
GCTGCCGGGC GCTACCTGAA GCTGAAGGTG GAGCTGGACG ATCTCCCCGG TGCCCTGGCG 
CGACTTGCGA CGGAAATTGC CGAGGCTAAA GCCAACATCT CCATCATCAC CCATGACCGG 
CGCTCGAAAT CGCTCCCCAT CGGCAAGACC GAGGTCCTCA TCGAGCTGGA GACCCGGGGG 
TTCGAGCACA TTCAGGAGGT TATCTCTCAC CTGCAGGGGG TGGGGTATCT GGTGGATGTG 
CTGAAATAA 

 

Protein sequence

MLPYTLIQEA DDRLRKRVRR TELIHSHHFS EKLGIPIYFK CENLQRTGAF KIRGALNFMT 
SQPREALAKG VITASAGNHA QGVAFSADLL GVPSTVFMPE STPPQKVFAT RDYGAEVVLT 
GRNFDEAYAA AVQAQEERGA LFVHPFDDPL VMAGQGTIGL EVLQELPDVA NILVPIGGGG 
LIAGIATAIR ETHPHVRIIG VETAAAPSAH YSLQKGKIVQ VPVTVTLADG IAVKKPGVNT 
FPIIRDLVDE VVLVEEEEIA LAIVALLERT KLLVEGAGAV PLAALLNRRV TDLSGKTVCV 
LSGGNIDVKT ISVVVERGLV AAGRYLKLKV ELDDLPGALA RLATEIAEAK ANISIITHDR 
RSKSLPIGKT EVLIELETRG FEHIQEVISH LQGVGYLVDV LK