| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU0425 |
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| Symbol | fliR |
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| ID | 2685438 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sulfurreducens PCA |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002939 |
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| Strand | + |
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| Start bp | 454550 |
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| End bp | 455344 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637125090 |
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| Product | flagellar biosynthesis protein FliR |
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| Protein accession | NP_951484 |
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| Protein GI | 39995533 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1684] Flagellar biosynthesis pathway, component FliR |
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| TIGRFAM ID | [TIGR01400] flagellar biosynthetic protein FliR
[TIGR01401] type III secretion protein SpaR/YscT/HrcT |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTCCAC TGACCACACC ATTCCCCACG GCCAACGACG TGGCCTTCTT CACTCTGGTG
ATGGGAAGGA TGGCGGGCAT CTTCGCAGCC ATTCCCATCT TCGGCGGGCG GCGGGTGCCG
ACCCCCATCA AGGCCTTGCT CGTCTTCGCC ATGACCATGG TCTGCTTCCC CATCATCAAG
GAAAAGATGC CGCAGCTTCC GACCGACGTG CTCTCCCTGG GCTTCCTCAT GGTGCAGGAG
GTACTGGTCG GCGTGTCGCT TGGGTTGCTG TCCCTGATCA TCTTCGCCGC CGTCGAGTTC
GCCGGCCAGA TCGTCAGCGT CCAGATCGGC CTCACCATCG TGACCGAATT CGATCCGTCC
CAGGGAGGCC AGCTGTCGAT CATGTCGATC ATCCTGGAGA TGCTGGCCAC GCTCCTGTTC
CTCTCCCTGG GCATGCACCA CATCTTCATC GGAGCGCTGG TCCAGAGCTA TGACGTCCTC
CCCCTGGGGG CGTGGCACAT GAGCGGCGCG CTTCTCCAAT TCATCGTGAC TACCATCGGC
GAGGTGTTCG TCCTGGCGGT CCGGCTCGCG GCGCCGGTGA TGGTCACCCT CCTGGCGACC
AGCGTCATGC TCGGCATCAT GGCCCGCTCG TTCCCCCAGA TGAACGTCTT TTTCGTCAGT
ATGCCCCTGA ACATCGGCAT CGGATTCATT GTTCTGGGGC TTTCCCTCCC TCTCTTCCTC
CATACCGTCC AAGGGCATTT CGGCTTGCTC GACGAACAGC TCAAGACCAT GATGAAGCTC
ATGGGTAAGG GATGA
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| Protein sequence | MFPLTTPFPT ANDVAFFTLV MGRMAGIFAA IPIFGGRRVP TPIKALLVFA MTMVCFPIIK
EKMPQLPTDV LSLGFLMVQE VLVGVSLGLL SLIIFAAVEF AGQIVSVQIG LTIVTEFDPS
QGGQLSIMSI ILEMLATLLF LSLGMHHIFI GALVQSYDVL PLGAWHMSGA LLQFIVTTIG
EVFVLAVRLA APVMVTLLAT SVMLGIMARS FPQMNVFFVS MPLNIGIGFI VLGLSLPLFL
HTVQGHFGLL DEQLKTMMKL MGKG
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