Gene GSU0386 details

Gene Information

• Locus tag: GSU0386
• Symbol: radC
• ID: 2686635
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter sulfurreducens PCA
• Kingdom: Bacteria
• Replicon accession: NC_002939
• Strand: -
• Start bp: 418326
• End bp: 419015
• Gene Length: 690 bp
• Protein Length: 229 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 637125051
• Product: DNA repair protein RadC
• Protein accession: NP_951445
• Protein GI: 39995494
• COG category: [L] Replication, recombination and repair
• COG ID: [COG2003] DNA repair proteins
• TIGRFAM ID: [TIGR00608] DNA repair protein radc

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAGGCG GCATCAAGGC GTGGCCCGAG GACGAGCGGC CACGGGAAAA GCTCTTGCGG 
CGGGGAGCTC CGGTCCTATC GGACGCGGAA CTGCTGGCCC TCATCATCCG GACCGGTGAC 
TCGGTGACCG GACGGAGCGC CATCGACCTG GGGCGGGCGC TCCTTCAGGA GTGCGGCGAC 
CTCCGCACTC TTGCCGGAGC CACCGTCAGC GAGCTCTGCG CGGTGAAGGG CATGGGGACG 
GCAAAGGCAA CCTCCATCAA GGCGGCCCTG GAAATGGCCT CTCGCATCAA TTCCGAGCGG 
CTCATGATCT GCAGCGAACG GTTCACCTCT CCCGAACAGG TCTACAATCA CTACCACTAT 
GCCTTCCGGG ACCGACGCAA GGAATACTTC ATGGCCCTGC TGCTGGACGG AAAGAACCGG 
ATCATGCGCG AGATCCAGGT TTCGGAAGGC TCCCTCAACC AGAGCATCGT TCATCCCCGC 
GAGGTCTTCA ACCCGGCCGT CCGGGAGTCC GCGGCCGCGG TCATCCTTGT CCACAACCAC 
CCCACCGGTG ATCCGGCCCC GAGCCGCGAA GACCTTGAAA TCACCCGCCG CCTGCGGGAA 
GCGGGTGACA TCATGGGCAT CAGGGTCCTG GACCACATCA TCATCGGTGA CGGTCGCTTC 
ACCAGCTTTG TCTCGGCTGG ATTACTCTAG 

 

Protein sequence

MAGGIKAWPE DERPREKLLR RGAPVLSDAE LLALIIRTGD SVTGRSAIDL GRALLQECGD 
LRTLAGATVS ELCAVKGMGT AKATSIKAAL EMASRINSER LMICSERFTS PEQVYNHYHY 
AFRDRRKEYF MALLLDGKNR IMREIQVSEG SLNQSIVHPR EVFNPAVRES AAAVILVHNH 
PTGDPAPSRE DLEITRRLRE AGDIMGIRVL DHIIIGDGRF TSFVSAGLL