| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU0350 |
|---|
| Symbol | nuoM-1 |
|---|
| ID | 2686727 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sulfurreducens PCA |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002939 |
|---|
| Strand | + |
|---|
| Start bp | 379791 |
|---|
| End bp | 381359 |
|---|
| Gene Length | 1569 bp |
|---|
| Protein Length | 522 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 637125016 |
|---|
| Product | NADH dehydrogenase I, M subunit |
|---|
| Protein accession | NP_951410 |
|---|
| Protein GI | 39995459 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1008] NADH:ubiquinone oxidoreductase subunit 4 (chain M) |
|---|
| TIGRFAM ID | [TIGR01972] proton-translocating NADH-quinone oxidoreductase, chain M |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCAGT TTCCGTTAAT CAGCGTGATG ACCTTTCTTC CACTCCTGGG GGTCGTACTG
CTCTTCTTCG TCCCCAAGCA GAGCCACTCG GTGCACAGGA TGCTCGCCTT GCTGGTCTCT
CTGGTGACCT TTGTCGTGTC GATACCTCTG GTTACTGGAT TCCAGAGTAA CGCCGACTTC
CAGTTCGTGG AGAAAATGCC GTGGATAGCT GCGGGTCCGT TCCAGATGAA CTATCACGTT
GCAATCGATG GTATCAGTCT CTGGCTCGTT CTCCTCACGA CATTTATCAT GCCGATCGCC
ATCCTCTCTA CCTGGACAGC GGTAGAAGAG AAGGTCAAGG AGTACATGAT CTGCCTCTTG
CTGCTTGAAG TGGGAATGCT TGGAGCTTTC GTGTCGCTTG ATCTCTTCCT GTTCTACATC
TTCTGGGAAG TGATGCTCAT ACCGATGTAT TTCATCATCG GGATCTGGGG TGGTAAAAAT
AAGATTTATG CTGCAGTCAA ATTCTTCATC TACACGATGG TTGGCTCCAT GCTCATGCTG
GTCGCTCTGG TTACCCTCTA CTTCAAGGCA GGGGCTGGAG ACTTCAACGT GCTCAGGTTC
TATGAAGTAA CTCTTGATCC GGCAACACAA GTCTGGATGT TCTTGGCCTT TGCCCTGGCA
TTTGCCATCA AAGTGCCTAT GTTCCCTCTC CACACGTGGC TTCCGGATGC TCACACCGAA
GCGCCGACGG CCGGCTCGGT CATTCTGGCT GCAGTGCTCC TGAAGATGGG GACTTACGGT
TTCGTTCGTT TTGCAATGCC GCTCTTCCCC GACGCAACCG ATAAATTCAC CCCCCTCATT
GCTACGCTTT CGGTTATTGG CATCATATAC GCTGCCCTTG TTGCAATGGT CCAAGAAGAT
GTCAAGAAGC TTGTAGCGTA CTCATCTGTT GCTCACCTGG GCTACGTTAT GCTGGGTGTG
TTCGCACTGA ATCTTCAAGG ACTTTCCGGT GGAATGCTGC AAATGCTCAA CCACGGTGTC
TCAACCGGCG CACTGTTCCT CATCGTTGGC TTTATTTATG AGCGCCGCCA CACTCGACTG
ATCACGGATT TCGGAGGGCT CGCCAAGCAA ATGCCGGTGT TCGCTACGAT ATTTATGATC
GTCACGCTTT CCTCGATCGG TCTACCCGGC ACGAACGGTT TCGTAGGGGA ATTCCTTGTT
CTTCTCGGTG CGTTTGAAAG TGAGCTTCGT TGGTATGCTG TAATCGGTAC AAGTGGTGTT
ATTCTGGCAG CCGTTTACAT GCTCTGGATG TTCCAGCGCG TTATGTTCGG GGAGCTCACA
AACCCAAAGA ACCAGACCTT GTGTGATCTG AATGCACGTG AAGTCGGGAT CATGCTTCCG
CTACTCGTTC TGATCTTCGT GATGGGTGTA TATCCCACTC CTTTCATTGA GAAGATGAGT
CCTTCACTTG AGAAACTCAT TGTTCATGTG AAGACCAAGC AGCAGGGTGC CGTTGCTCAG
GTGGAGACCG TGCCTGCTGC TCCCCAGGTC ATGCCTGCAG CTGCTGTTGT GCCTGCAGAA
CATAAGTAA
|
|---|
| Protein sequence | MSQFPLISVM TFLPLLGVVL LFFVPKQSHS VHRMLALLVS LVTFVVSIPL VTGFQSNADF
QFVEKMPWIA AGPFQMNYHV AIDGISLWLV LLTTFIMPIA ILSTWTAVEE KVKEYMICLL
LLEVGMLGAF VSLDLFLFYI FWEVMLIPMY FIIGIWGGKN KIYAAVKFFI YTMVGSMLML
VALVTLYFKA GAGDFNVLRF YEVTLDPATQ VWMFLAFALA FAIKVPMFPL HTWLPDAHTE
APTAGSVILA AVLLKMGTYG FVRFAMPLFP DATDKFTPLI ATLSVIGIIY AALVAMVQED
VKKLVAYSSV AHLGYVMLGV FALNLQGLSG GMLQMLNHGV STGALFLIVG FIYERRHTRL
ITDFGGLAKQ MPVFATIFMI VTLSSIGLPG TNGFVGEFLV LLGAFESELR WYAVIGTSGV
ILAAVYMLWM FQRVMFGELT NPKNQTLCDL NAREVGIMLP LLVLIFVMGV YPTPFIEKMS
PSLEKLIVHV KTKQQGAVAQ VETVPAAPQV MPAAAVVPAE HK
|
|---|
| |