| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU0162 |
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| Symbol | |
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| ID | 2687776 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sulfurreducens PCA |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002939 |
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| Strand | + |
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| Start bp | 179342 |
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| End bp | 180574 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637124829 |
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| Product | L,L-diaminopimelate aminotransferase |
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| Protein accession | NP_951224 |
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| Protein GI | 39995273 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | [TIGR03542] LL-diaminopimelate aminotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAAGA TCAATGACCA CTATCTGAAA CTCAAGGCCG GCTACCTCTT CCCGGAGATC
GGCCGCCGCG TGCGGGAGTT CGCCGCCGCC AACCCGAGCG CCAAGGTGAT CCGCCTCGGC
ATCGGCGATG TCACCCGGCC CCTGGCCCCG GCCGTGATCA AGGCGTTCCA CGAGGCCGTG
GACGACCTGG CCACCACCGA GAATTTCGCC GGGTACGGCC CGGAGCAGGG GTATGACTGG
CTGATCAACG CCATTATCGA AAAGTCCTAC AAGCCCCTGG GCGTGGACCT CAAGACCGAG
GAGATGTTCA TCTCCGACGG CTCCAAGTGC GACTGCGCCA ACATCCTGGA CATCTTCGCC
CTCGACAACG TCGTGGCCAT CGGCGACCCG GTCTACCCGG TCTACAACGA CACCAACGTC
ATGATCGGCC GCACCGGCGA GGCCGACGAC AAGGGCTACT ACAAGGGCAT CGTCTACATG
CCCTGCACCG AGGAGAACGG CTTCATTCCG TCCCTCCCCA CCGAGAAGGT GGACATCATC
TATCTCTGCT TCCCCAACAA CCCCACCGGC ACCGTGGCCA CCAAGGCCGA GCTGAAGAAG
TGGGTCGACT ACGCCATCGC CAACGACGCC GTCATCTTCT TCGACGCCGC CTACGAGGCC
TTCATCACCG ATCCCGCAAT CCCCCACTCC ATCTACGAGA TCGAAGGGGC CAAGAAGTGC
GCCATCGAAT TCCGCTCCTT CTCCAAGACT GCCGGCTTCA CCGGCGTCCG CTGCGGCCTG
GTGGTCGTGC CGGAAGAGGT CATGGGCACC ACGCCGACGG GCGAGAAGTA CAGCTTCAAC
AAGCTCTGGC TGCGCCGCAC CACCACCAAG TTCAACGGCG CCTCCTACCC GGTGCAGAAG
GCCGCCGCCG CAGTCTACTC CGACGAGGGG TGGCAGCAGA ACAAAGAGAT CATCGACTAC
TACATGGAGA ATGCCCGGAT CATTCGCGAG GGCCTGGCCG CCGCCGGCCT CACCGTCTAC
GGCGGGGTCA ATGCCCCCTA CATCTGGCTC AAGACCCCCG GCGGCATGAG CAGTTGGGAC
TTCTTCGACA AGCTGCTGAA CGAGTGCAAC GTGGTCGGAA CGCCGGGGAG CGGATTCGGC
CCCAGCGGCG AAGGGTTCTT CCGGCTGTCG GCCTTCGGCC ATCGCGAGAA TGTGATCGAG
GCGGTGGAGA GGATAAAGAA GAATTTGAAG TAG
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| Protein sequence | MAKINDHYLK LKAGYLFPEI GRRVREFAAA NPSAKVIRLG IGDVTRPLAP AVIKAFHEAV
DDLATTENFA GYGPEQGYDW LINAIIEKSY KPLGVDLKTE EMFISDGSKC DCANILDIFA
LDNVVAIGDP VYPVYNDTNV MIGRTGEADD KGYYKGIVYM PCTEENGFIP SLPTEKVDII
YLCFPNNPTG TVATKAELKK WVDYAIANDA VIFFDAAYEA FITDPAIPHS IYEIEGAKKC
AIEFRSFSKT AGFTGVRCGL VVVPEEVMGT TPTGEKYSFN KLWLRRTTTK FNGASYPVQK
AAAAVYSDEG WQQNKEIIDY YMENARIIRE GLAAAGLTVY GGVNAPYIWL KTPGGMSSWD
FFDKLLNECN VVGTPGSGFG PSGEGFFRLS AFGHRENVIE AVERIKKNLK
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