Gene GSU0115 details

Gene Information

• Locus tag: GSU0115
• Symbol: pdxA
• ID: 2686111
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter sulfurreducens PCA
• Kingdom: Bacteria
• Replicon accession: NC_002939
• Strand: +
• Start bp: 129587
• End bp: 130600
• Gene Length: 1014 bp
• Protein Length: 337 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 637124782
• Product: pyridoxal phosphate biosynthetic protein PdxA
• Protein accession: NP_951177
• Protein GI: 39995226
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG1995] Pyridoxal phosphate biosynthesis protein
• TIGRFAM ID: [TIGR00557] 4-hydroxythreonine-4-phosphate dehydrogenase

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.61474
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAAAC CTCGCATTGT TATCACGATG GGTGATCCGA CCGGCGTCGG CCCCGAGATC 
ATAGCGAAAG CCCTGGCCGA TCCGGCGGTG AGAGAGTGCT GTCGACACCT TGTGGTCGGC 
GACGAGTTCG CCATGAGCCG GGGAATTGCT CTGACCGGAA CCGGTTTCAG AATAGAGACG 
TCAGAGAGCG TTCCCTTTGA GGAACCTGCC GACGGAGTCA TTACGCTGCG CAAGGTTACG 
TCCCTCTCCG CCGAAGACCT TTGCTATGGT CAACCGACGA TCGCCAGCGG TGATGCAGTC 
TTTCGCTCCA TCTGTCATGC AGCAGACCTC TGTCTCAAGG GTGAGGCTGA CGGTATGGCA 
ACGGCACCGA TCAACAAAGG GGCTCTCAAC CGGGCGGGAC ACCGGTATCC CGGCCACACG 
GAGCTTCTTG CCGAGCTTAC CGGAGCAGAT CGCGTCGTCA TGATGCTGGC AGGGGCACGG 
CTGCGGGTAG CGCTGGTAAC CATTCATGAG GCCCTGGTGC GGGTCCCCGC ACTGGTGACA 
TTCGAACAAG TCCTTGAAAC CATTCGTATC ACGCACCGGG ACGTGCACCG CTACTTTACA 
CGCAATCCCC GCATCGCGGT GCTTGCCCTC AACCCCCACT GCGGCGAGGG CGGTATGTTC 
GGGGACGAAG AGTCTCGGAT CATTGCTCCA GCTGTCCAGG CGGCACGGCA GGAAGGTATT 
GACGCGACAG GCCCTCTATC CGCAGATACC CTCTTTCACT TTGCCGTGCA CGGAGCCTAT 
GATGCGGTTG TCTGCATGTA CCACGACCAG GGGCTCATTC CCCTGAAGCT CCTCCATTTT 
GACGATGGTG TGAACGTTAC CCTGGGACTC CCCATTATTC GGACCTCAGT GGACCACGGT 
ACCGCCTACG ACCTGGCGGG CACAGGGAAG GCTTCTGCCG AGAGTATGAA GGCCGCCATC 
ATGATGGCCG CGGCAATGGC CGGGAGCAGG CGAGAGGAGA GCGGAGCGCC GTGA 

 

Protein sequence

MKKPRIVITM GDPTGVGPEI IAKALADPAV RECCRHLVVG DEFAMSRGIA LTGTGFRIET 
SESVPFEEPA DGVITLRKVT SLSAEDLCYG QPTIASGDAV FRSICHAADL CLKGEADGMA 
TAPINKGALN RAGHRYPGHT ELLAELTGAD RVVMMLAGAR LRVALVTIHE ALVRVPALVT 
FEQVLETIRI THRDVHRYFT RNPRIAVLAL NPHCGEGGMF GDEESRIIAP AVQAARQEGI 
DATGPLSADT LFHFAVHGAY DAVVCMYHDQ GLIPLKLLHF DDGVNVTLGL PIIRTSVDHG 
TAYDLAGTGK ASAESMKAAI MMAAAMAGSR REESGAP