| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU0101 |
|---|
| Symbol | |
|---|
| ID | 2688014 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sulfurreducens PCA |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002939 |
|---|
| Strand | + |
|---|
| Start bp | 114856 |
|---|
| End bp | 116634 |
|---|
| Gene Length | 1779 bp |
|---|
| Protein Length | 592 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637124768 |
|---|
| Product | ABC transporter, ATP-binding/permease protein |
|---|
| Protein accession | NP_951163 |
|---|
| Protein GI | 39995212 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCACTACG GCAGCGCCTA CGAAGATGAA ATAGTCGGCA AGGCATACGA TCGGGGGCTC
ATGCTGCGGT TCATCCGCTA TGTGCATCCC TATCGCTGGC TGGCGCTGGC GGCGCTCGTG
CTCCTGCCGC TCTCGGCGGC GGCCCGGCTG GCGCAGCCGC TGGTCCTCAA GGCCGCCATC
GACGATCACA TCGTCACGGG ACGGCTGGAG GGATTGCCGC TGGTTGCCGC AGGGTTTCTC
CTGCTCATCG TGGCCGAATC GCTGATAACC TTTCTCGAAG TGTGGCTTCT CCAGTACCTG
GGACAGCGGG TAATGCTCGA CCTGCGGTTG GAGCTGTTCG CCCACGTGCA GCGACTTCCC
GTCTCTTTCT TCGACCGTAC CGCCACCGGC GGCCTCGTGA CACGGCTTAC CAGCGACGTG
GAGGTGCTCG GCGAAATGTT TGCCGCCGGC ATCATAACTG TTGTTGGCGA CATCCTCTTT
CTGGCCGGTA TCGTCGGCGT AATGCTCTGG TTGAACCCCC CGCTTTCGTT GATCACCTTT
TCGGTGCTGC CGCTGCTTGT CTGGGTCGCT TTCACATTCA GGATCAGGAT GCGCAAGGCG
TTTCGGGAGG TGCGCGCCCG CCTGGCGAAC CTGAACACTT TTTTGGCCGA AACCATCGGC
GGAATGTCGG TGATTCAGCT CTTCAACCGG CAAGCCGGGG AGCGCGCCGA GTTTTCCCGG
CTCAACGGCT CATACCGTGA CGCCAATCTG CCGGTCATCA CCTGGGACGC CTCTCTCTAC
GCTCTTGTGG AGACACTCTC CTCGGTGGCT GTCGGCCTCA TCATCTGGTA CGGCGGAGGA
GAGGTCCTCA GGGGAGCCCT TACCTTCGGA GCGCTGGTTG CCTTCATTCA GTACATCGAG
AAATTTTTCG GCCCGATCCG GGACCTGTCG GCAAAATACT CCATCATGCA GGGCGCCATG
GCCGCCCTTG AGCGGATCTT CGGCCTGCTC GACACGGCAC CCGATCATGA CGCCGGGGTC
AGCGGTCCTG CCGTCAGCGC CGGCGCGCCT CCCATCGAAA CCATCCGGTT TCGCAACGTC
TGGTTTGCCT ACCAGGAGGA CGACTACGTC CTGCGTGGAA TCGACCTGAC GATTCGCCGG
GGCGAGACCG TGGCGCTCGT TGGGGAGACC GGCGGCGGCA AGACGACGGT GACCCGACTC
CTTTCGCGCT TCTACGACGT AAATAGGGGC GACATCCTTT TCAACGGCGA TGATGTCCGC
TCAATCCCCC TGTCAGAGCT CCGCCGACGG ATCGGGGTGG TTCTCCAGGA CCCTTATCTC
TTCACCGGCA CGGTGGGCTT CAACATTCAT CTGGGAGACG AGCGTGCCCG TGCCCGGATG
GATGACGCAG CCCGACTGGT GGGGGCAGAC CGCTTTATCC GTCTCCTCCC CGGAGGTTAC
GACGAGCAGG TGCGCGAGCG AGGGAGCAAC CTGTCGGCCG GGGAGCGCCA ACTCATTTCC
TTTGCCCGCG CCGTTGCCTT CGACCCTGAG ATTCTCGTGC TGGACGAAGC AACCGCCAGC
ATCGACACCG AGTCGGAGCG GCTCATTCAG GACGGGCTTG CCGCACTCAT GGCTGGTCGC
ACTTCCATTG TGGTGGCGCA CCGCCTCTCG ACGGTCCAGG GGGCGGACCG GATAGTGGTC
ATCCACCGGG GAGAAAAGGT AGAAGAGGGG ACCCACGGCG AGCTCCTGGC GCAAGGGGGC
ATCTATGCAC GGCTCTATCA GCTTCAGTTC AGGGATTGA
|
|---|
| Protein sequence | MHYGSAYEDE IVGKAYDRGL MLRFIRYVHP YRWLALAALV LLPLSAAARL AQPLVLKAAI
DDHIVTGRLE GLPLVAAGFL LLIVAESLIT FLEVWLLQYL GQRVMLDLRL ELFAHVQRLP
VSFFDRTATG GLVTRLTSDV EVLGEMFAAG IITVVGDILF LAGIVGVMLW LNPPLSLITF
SVLPLLVWVA FTFRIRMRKA FREVRARLAN LNTFLAETIG GMSVIQLFNR QAGERAEFSR
LNGSYRDANL PVITWDASLY ALVETLSSVA VGLIIWYGGG EVLRGALTFG ALVAFIQYIE
KFFGPIRDLS AKYSIMQGAM AALERIFGLL DTAPDHDAGV SGPAVSAGAP PIETIRFRNV
WFAYQEDDYV LRGIDLTIRR GETVALVGET GGGKTTVTRL LSRFYDVNRG DILFNGDDVR
SIPLSELRRR IGVVLQDPYL FTGTVGFNIH LGDERARARM DDAARLVGAD RFIRLLPGGY
DEQVRERGSN LSAGERQLIS FARAVAFDPE ILVLDEATAS IDTESERLIQ DGLAALMAGR
TSIVVAHRLS TVQGADRIVV IHRGEKVEEG THGELLAQGG IYARLYQLQF RD
|
|---|
| |