Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU0029 |
Symbol | |
ID | 2685630 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | - |
Start bp | 38522 |
End bp | 39301 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637124691 |
Product | carbon-nitrogen family hydrolase |
Protein accession | NP_951091 |
Protein GI | 39995140 |
COG category | [R] General function prediction only |
COG ID | [COG0388] Predicted amidohydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.214118 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATCGGA CCGTCAAGGC AGGAGCCGTA CAGTTCACTG TCAGGCTCGG CGATATTGAC GCAAACGTGG CGTACGTCCA GAAAGCCCTG CGGCGACTGG CATCCCAGGG ATGCCGGCTG GCGGTTCTCC CCGAGATGTG GAGTACCGGC TACGCCTACA AGGAGCTCAA CGAACTGGCC AAGCGGACCC CTGAAGTGGT GGCGGAATTG GGCCGGCTCT CCAGGGAACT GGAGATGGTC ATCGTCGGCA GCATGCCGGA GCCCCACGGT GAAAAGGTCT TCAATACCGC GTATGTTCTT GATCGTGGCG AGTTGCTCGG TTCCTATCGC AAGATCCACC TCTTCTCCCT CATGGGAGAG GACCGCTCCC TAGACGGCGG CGACCGGTGG CTAGTGGTCG ATACCCACGT GGGTCGGCTC GGCGTCTTCA TCTGCTACGA CCTTCGCTTC CCGGAGCTGG CGCGCCGGCT GGCGGTGGAA GGAGCCGAAA TCATCGTCGT CCCTGCCGAG TGGCCCAAAC CGCGGGAAGA ACACTGGCGG GCGCTGTTGC GGGCCCGGGC CATCGAGAAC CAGCTCTTCG TGGTGGCCGC CAACTGCTGC GGAGTCCAGG GCAAGCTCGA CTTCTTCGGC TCCAGCCTGA TCATCGACCC CAAGGGAGAG CTCCTGGCCG AAGGCGGCTA CGACCCATGC GAACCAATGG CAACCCTCGA CTTCCAGGTG ATGGAGACAT GGCGCGACCA GATACCCTGC TTCGCCGACC GCAGGCCTTC CTGCTACTGA
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Protein sequence | MNRTVKAGAV QFTVRLGDID ANVAYVQKAL RRLASQGCRL AVLPEMWSTG YAYKELNELA KRTPEVVAEL GRLSRELEMV IVGSMPEPHG EKVFNTAYVL DRGELLGSYR KIHLFSLMGE DRSLDGGDRW LVVDTHVGRL GVFICYDLRF PELARRLAVE GAEIIVVPAE WPKPREEHWR ALLRARAIEN QLFVVAANCC GVQGKLDFFG SSLIIDPKGE LLAEGGYDPC EPMATLDFQV METWRDQIPC FADRRPSCY
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