Gene GSU0028 details

Gene Information

• Locus tag: GSU0028
• Symbol: tolQ
• ID: 2688569
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter sulfurreducens PCA
• Kingdom: Bacteria
• Replicon accession: NC_002939
• Strand: -
• Start bp: 37751
• End bp: 38428
• Gene Length: 678 bp
• Protein Length: 225 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 637124690
• Product: tolQ protein
• Protein accession: NP_951090
• Protein GI: 39995139
• COG category: [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG0811] Biopolymer transport proteins
• TIGRFAM ID: [TIGR02796] TolQ protein

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.0957491
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGACACTAT TCGCTGGGAC CGGGCTGGTG GTCAAGCTGG TACTGGTCGT GCTCATCTTC 
TTTTCCGTGG TTTCCTGGGC CATCATTTTC TTCAAGCTCC TGCAGATCAA CCGGGCAAAC 
GGCGAATCGG ACCGGTTCCT TGACTTCTTC TGGAAAACCA AGCGGTTCGA CGCCATCAGC 
TCCCAACTGG ACCGGTTCGG AAACTCCCCC CTGTCGGTAC TGTTCAACGA AGGCTACGCC 
GAGTTGCGCC GGCTTCTCGA CAAAGGAGGG GAGCAACGGG ACGAGCCGGG CGTGGTGAGC 
ACCGACCTGG GGGGGATCGA TAACATCGCC CGTGCGCTGC GCCGCGCGAC CACCTCGGAG 
ATCACCAGGC TTGAGAAATA CGTAACCTTC TTGGCCACCA CCGGCTCCAC GGCACCCTTT 
ATCGGACTGT TCGGAACAGT CTGGGGAATC ATGAACGCAT TCAAGGGGAT CGGTGAAACC 
GGCTCCGCAT CGCTTGCCGT CGTTGCCCCG GGCATCGCCG AGGCGCTGAT CGCCACCGCC 
ATCGGCCTGG TGGCTGCCAT TCCGGCGGTC ATGGCCTACA ACCACTTCCA GCACAAAATC 
AAGGTCCTCA TCGCCTCCAT GGACAACTTC TCCACCGAGT TCCTCAACAT CGTCCAGCGG 
ACCTTTGCGG GAAAATAG 

 

Protein sequence

MTLFAGTGLV VKLVLVVLIF FSVVSWAIIF FKLLQINRAN GESDRFLDFF WKTKRFDAIS 
SQLDRFGNSP LSVLFNEGYA ELRRLLDKGG EQRDEPGVVS TDLGGIDNIA RALRRATTSE 
ITRLEKYVTF LATTGSTAPF IGLFGTVWGI MNAFKGIGET GSASLAVVAP GIAEALIATA 
IGLVAAIPAV MAYNHFQHKI KVLIASMDNF STEFLNIVQR TFAGK