| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU0003 |
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| Symbol | gyrB |
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| ID | 2686080 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sulfurreducens PCA |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002939 |
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| Strand | + |
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| Start bp | 3901 |
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| End bp | 6288 |
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| Gene Length | 2388 bp |
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| Protein Length | 795 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637124665 |
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| Product | DNA gyrase, B subunit |
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| Protein accession | NP_951065 |
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| Protein GI | 39995114 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
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| TIGRFAM ID | [TIGR01059] DNA gyrase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGACG AACAGAACTA CGATTACGGT GCAGACAAGA TCAAGGTCCT GGAGGGGCTC
GAGGCGGTAC GCAAGCGCCC CGCCATGTAC ATCGGCTCCA CCGCGGCCCA GGGGCTCCAC
CACCTGGTCT ACGAGATCGT GGACAACTCC ATTGACGAGG CCCTGGCCGG CTACTGCAAC
GAGGTGAACG TCACCATCCA TCTGGATGGT TCCCTGACGG TGGTGGACAA TGGCCGCGGC
ATTCCTACCG ACATCCACCC CACGGAGGGG AAGCCGGCGG CGGAGGTGGC CCTCACGGTC
CTCCATGCCG GCGGCAAGTT CGACAACACC TCCTATAAGG TCTCCGGCGG GCTCCACGGG
GTCGGGGTCT CGGTCGTGAA CGCCCTGTCC AGGAAGCTGG AGCTGGAGAT TCGCCGGGAC
GGGAAGGTGT ACCGCCAGTC CTACGCCTGC GGCGACCCCC AGACTCCCCT CGAAGTGATG
GGGGAAACGA AAAAGCGTGG GACCAAAATA ACCTTCCTCC CCGACGATAC CATCTTCGAG
ACCACGGAGT TTTCCTTCGA CGTTCTTTCC CAGCGGCTCC GGGAGCTGGC GTTCCTCAAC
GCCGGGGTCC GGATCACCAT CACCGACGAA CGGGAGGAGG GAAAGCACCA CGACTTTCAC
TACGAAGGAG GCATCGTCTC CTTTGTGGAG TACCTGAACC GCAACCGGAC CGCCCTCCAC
CCGAAGCCGA TCTACTTCAA GGGTGAAAAG GCAGGAGTCG AGATGGAGGT GGCCCTCCAG
TACAACGATT CCTATGACGA AAAGGTTTTC TCTTTTGCCA ACAACATCAA CACCCACGAG
GGTGGAACCC ACTTGGTGGG GTTCCGGGCG GCCCTCACCC GGACCATGAA CACCTATGCC
GCCGCCAACG AACTCCTCAA AAAGGAGAAG GTTGCCATCT CCGGCGAGGA TCTGCGAGAG
GGTCTCACGG CGGTCATCTC GGTCAAGATT CCCCAACCAC AGTTCGAGGG GCAGACCAAG
ACCAAGCTGG GGAACTCGGA GGTTAAGGGG TACGTGGAAT CCCTCATGAA CGAGAAACTG
GCGGTCTTCC TGGAAGAGAA CCCGAAGATC GCCAAAGACA TCATCGGCAA ATCCATCGAG
GCGGCCCGTG CCCGGGAAGC GGCCCGCAAG GCGCGGGAAT TGACCCGGCG CAAGGGCGCC
CTGGACATCT CCAACCTTCC GGGCAAACTG GCCGACTGCC AGGAGCGGGA TCCGGCCCTG
TGCGAACTCT ACCTGGTGGA GGGCGACTCC GCCGGCGGTT CCGCCAAACA GGGGCGCGAC
CGGAAATTCC AGGCCATTCT GCCGCTGAAA GGAAAGATCC TCAACGTGGA GAAGGCCCGG
TTCGACAAGA TGCTTTCCTC CCAGGAGATC GGGACCCTTA TCACGGCGCT CGGCACCGGT
ATCGGGAAAG ACGACTTCGA CATCGCCAAG CTCCGCTACC ACCGGATCAT CGTCATGACC
GACGCCGACG TGGACGGCTC CCACATCCTG ACGCTGCTGC TCACCTTCTT CTTCCGGCAG
ATGCCGGAGG TGGTGGAGCG GGGGCACCTC TACATCGCCC AGCCCCCCCT CTATAAGGTG
AAGCGAGGGC GCAAGGAGCT CTATCTCCGC AATGAGGCGG CCATGCAGGC CTACCTCCTT
GAGGAGGGGA CCGAGGACAT GCTCCTTTTT CTGGAGAGCG GCGAGAAGAC CTACAGCGGC
AAGCAGATCA TCCCGATCCT CAAGCAGTTG GTGGAGTATC GGACCATCCT GGATAAGGTA
GTGCGCAAGG GGATCAACGA GGAGCTCATA CGGGTATTCC TGCGGCTCGG CGTCAAGGGG
GGGATTGAGG ACATGGAGCA GTTGGTGCCG TTCCTGACGA ACATCTCCCG GGTCTATGAC
GGCGGCGATT TCAGCCCCTT GGACGACGGG CGGGTCATCG TGCGGCTCGG CAACCTCCGG
ATCGCCCTGG ATCAGCATAC GCTCGACCTC ATCGGTTCCT ACGAGTACGG GCTCCTGGTG
GAGAGCTACC GAAAGGTCAG GGATATCTTC GGCGACGGCC GGGCCGTGGT CTCCAGCGAG
GGTAAGGAAC TCTTCGCGAC CACCATCGGG CTCGACCTCC TCTCCTTCTT CATGGACAGC
GCCAAGAAGG GGCTCTCCAT CCAGCGCTAC AAGGGTCTCG GCGAGATGAA CCCGGAGCAG
CTCTGGGAAA CCACCATGGA GCCCGTCAAC CGGACCCTGC TCCAGGTGAA GATTGAGGAC
GCCATCGAGG CAGACACCAT ATTCACCATC CTCATGGGGG ACCAGGTGGA GCCCCGCCGG
GACTTCATCG AGCAGAACGC CCTGAACGTG TCGAATTTGG ACATTTAG
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| Protein sequence | MTDEQNYDYG ADKIKVLEGL EAVRKRPAMY IGSTAAQGLH HLVYEIVDNS IDEALAGYCN
EVNVTIHLDG SLTVVDNGRG IPTDIHPTEG KPAAEVALTV LHAGGKFDNT SYKVSGGLHG
VGVSVVNALS RKLELEIRRD GKVYRQSYAC GDPQTPLEVM GETKKRGTKI TFLPDDTIFE
TTEFSFDVLS QRLRELAFLN AGVRITITDE REEGKHHDFH YEGGIVSFVE YLNRNRTALH
PKPIYFKGEK AGVEMEVALQ YNDSYDEKVF SFANNINTHE GGTHLVGFRA ALTRTMNTYA
AANELLKKEK VAISGEDLRE GLTAVISVKI PQPQFEGQTK TKLGNSEVKG YVESLMNEKL
AVFLEENPKI AKDIIGKSIE AARAREAARK ARELTRRKGA LDISNLPGKL ADCQERDPAL
CELYLVEGDS AGGSAKQGRD RKFQAILPLK GKILNVEKAR FDKMLSSQEI GTLITALGTG
IGKDDFDIAK LRYHRIIVMT DADVDGSHIL TLLLTFFFRQ MPEVVERGHL YIAQPPLYKV
KRGRKELYLR NEAAMQAYLL EEGTEDMLLF LESGEKTYSG KQIIPILKQL VEYRTILDKV
VRKGINEELI RVFLRLGVKG GIEDMEQLVP FLTNISRVYD GGDFSPLDDG RVIVRLGNLR
IALDQHTLDL IGSYEYGLLV ESYRKVRDIF GDGRAVVSSE GKELFATTIG LDLLSFFMDS
AKKGLSIQRY KGLGEMNPEQ LWETTMEPVN RTLLQVKIED AIEADTIFTI LMGDQVEPRR
DFIEQNALNV SNLDI
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